Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 RPS23-208ENST00000512493 443 ntTSL 3 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 RNU6-416P-201ENST00000516265 103 ntBASIC6.16□□□□□ -1.42
SHISA3A0PJX4 RNU6-314P-201ENST00000516574 104 ntBASIC6.16□□□□□ -1.42
SHISA3A0PJX4 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 AP002453.2-201ENST00000533503 320 ntBASIC6.16□□□□□ -1.42
SHISA3A0PJX4 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 DPPA2P4-201ENST00000563717 878 ntBASIC6.16□□□□□ -1.42
SHISA3A0PJX4 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 AC243312.1-201ENST00000570582 275 ntBASIC6.16□□□□□ -1.42
SHISA3A0PJX4 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 RN7SL42P-201ENST00000579786 294 ntBASIC6.16□□□□□ -1.42
SHISA3A0PJX4 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 AC074135.1-201ENST00000594318 581 ntTSL 4 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 AC125494.2-201ENST00000602431 657 ntBASIC6.16□□□□□ -1.42
SHISA3A0PJX4 AC129492.5-201ENST00000603489 315 ntBASIC6.16□□□□□ -1.42
SHISA3A0PJX4 AC111186.1-201ENST00000604684 130 ntBASIC6.16□□□□□ -1.42
SHISA3A0PJX4 AL683813.2-201ENST00000605245 502 ntBASIC6.16□□□□□ -1.42
SHISA3A0PJX4 AP000860.1-201ENST00000605250 559 ntBASIC6.16□□□□□ -1.42
SHISA3A0PJX4 AC024560.3-201ENST00000608482 349 ntBASIC6.16□□□□□ -1.42
SHISA3A0PJX4 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 AC138904.2-201ENST00000614412 107 ntBASIC6.16□□□□□ -1.42
SHISA3A0PJX4 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 RN7SL820P-201ENST00000616437 299 ntBASIC6.16□□□□□ -1.42
SHISA3A0PJX4 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 TRIM60P14-201ENST00000513444 1419 ntBASIC6.16□□□□□ -1.42
SHISA3A0PJX4 AC092111.2-201ENST00000611627 1414 ntBASIC6.16□□□□□ -1.42
SHISA3A0PJX4 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHISA3A0PJX4 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.15□□□□□ -1.42
SHISA3A0PJX4 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.15□□□□□ -1.42
SHISA3A0PJX4 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SHISA3A0PJX4 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
SHISA3A0PJX4 AL669831.5-218ENST00000591702 1873 ntBASIC6.15□□□□□ -1.42
SHISA3A0PJX4 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.15□□□□□ -1.42
SHISA3A0PJX4 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SHISA3A0PJX4 TNPO1P2-201ENST00000426249 2665 ntBASIC6.15□□□□□ -1.42
SHISA3A0PJX4 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
SHISA3A0PJX4 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.15□□□□□ -1.42
SHISA3A0PJX4 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.15□□□□□ -1.42
SHISA3A0PJX4 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SHISA3A0PJX4 AC011447.7-201ENST00000624228 1590 ntBASIC6.15□□□□□ -1.42
SHISA3A0PJX4 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SHISA3A0PJX4 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SHISA3A0PJX4 C2orf80-201ENST00000341287 1238 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SHISA3A0PJX4 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SHISA3A0PJX4 snosnR66.1-201ENST00000391095 99 ntBASIC6.15□□□□□ -1.42
SHISA3A0PJX4 PTMAP8-201ENST00000397729 342 ntBASIC6.15□□□□□ -1.42
SHISA3A0PJX4 FGF7P8-201ENST00000402994 292 ntBASIC6.15□□□□□ -1.42
SHISA3A0PJX4 RNA5SP498-201ENST00000411342 120 ntBASIC6.15□□□□□ -1.42
SHISA3A0PJX4 RPL17P12-201ENST00000413391 526 ntBASIC6.15□□□□□ -1.42
SHISA3A0PJX4 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SHISA3A0PJX4 GAPDHP49-201ENST00000421421 961 ntBASIC6.15□□□□□ -1.42
SHISA3A0PJX4 EIF4A1P2-201ENST00000422633 1220 ntBASIC6.15□□□□□ -1.42
SHISA3A0PJX4 AC009480.2-201ENST00000422916 432 ntBASIC6.15□□□□□ -1.42
SHISA3A0PJX4 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
SHISA3A0PJX4 USP12PX-201ENST00000432383 1057 ntBASIC6.15□□□□□ -1.42
SHISA3A0PJX4 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
SHISA3A0PJX4 UBE2V1P3-201ENST00000439651 417 ntBASIC6.15□□□□□ -1.42
SHISA3A0PJX4 RPSAP40-201ENST00000442343 891 ntBASIC6.15□□□□□ -1.42
SHISA3A0PJX4 RPL7P36-201ENST00000444633 681 ntBASIC6.15□□□□□ -1.42
SHISA3A0PJX4 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC6.15□□□□□ -1.42
SHISA3A0PJX4 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.15□□□□□ -1.42
SHISA3A0PJX4 AC109454.1-201ENST00000471205 498 ntBASIC6.15□□□□□ -1.42
SHISA3A0PJX4 AC104687.1-201ENST00000485829 412 ntBASIC6.15□□□□□ -1.42
SHISA3A0PJX4 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.15□□□□□ -1.42
SHISA3A0PJX4 RPL9P6-201ENST00000492764 598 ntBASIC6.15□□□□□ -1.42
SHISA3A0PJX4 SETP14-201ENST00000497538 873 ntBASIC6.15□□□□□ -1.42
SHISA3A0PJX4 AL358832.1-201ENST00000497800 389 ntBASIC6.15□□□□□ -1.42
SHISA3A0PJX4 AC114300.1-201ENST00000502347 280 ntBASIC6.15□□□□□ -1.42
SHISA3A0PJX4 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC6.15□□□□□ -1.42
SHISA3A0PJX4 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.15□□□□□ -1.42
SHISA3A0PJX4 AC105252.1-201ENST00000503089 286 ntBASIC6.15□□□□□ -1.42
SHISA3A0PJX4 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC6.15□□□□□ -1.42
SHISA3A0PJX4 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SHISA3A0PJX4 NMNAT1P4-201ENST00000505598 840 ntBASIC6.15□□□□□ -1.42
SHISA3A0PJX4 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC6.15□□□□□ -1.42
SHISA3A0PJX4 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC6.15□□□□□ -1.42
SHISA3A0PJX4 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC6.15□□□□□ -1.42
SHISA3A0PJX4 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms