Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
ZC3H4Q9UPT8 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC8.46□□□□□ -1.05
ZC3H4Q9UPT8 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
ZC3H4Q9UPT8 AL353743.4-201ENST00000422653 1547 ntBASIC8.46□□□□□ -1.05
ZC3H4Q9UPT8 CASC19-206ENST00000641028 1430 ntBASIC8.46□□□□□ -1.05
ZC3H4Q9UPT8 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC8.46□□□□□ -1.05
ZC3H4Q9UPT8 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC8.46□□□□□ -1.05
ZC3H4Q9UPT8 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
ZC3H4Q9UPT8 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 SUGT1P2-201ENST00000379452 992 ntBASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 AL590143.1-201ENST00000405071 138 ntBASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 AL512422.1-201ENST00000407033 553 ntBASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 AL139098.1-201ENST00000407291 389 ntBASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 VDAC1P2-201ENST00000423609 850 ntBASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 USP9YP18-201ENST00000425912 695 ntBASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 RAB11AP1-201ENST00000442978 646 ntBASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 NANOGNBP1-201ENST00000448444 480 ntBASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 MTND3P10-201ENST00000450967 341 ntBASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 RN7SL552P-201ENST00000462094 276 ntBASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 AC092709.1-201ENST00000521355 1045 ntBASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 OR5BC1P-201ENST00000529327 739 ntBASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 AC007861.1-201ENST00000576671 674 ntTSL 5 BASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 AC008555.7-201ENST00000605008 583 ntBASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 AL121757.2-201ENST00000611223 313 ntBASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 AL589743.7-201ENST00000612637 233 ntBASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 ANKRD20A10P-201ENST00000457591 1515 ntBASIC8.46□□□□□ -1.06
ZC3H4Q9UPT8 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 AC016251.1-201ENST00000624299 4198 ntBASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 THAP12P7-201ENST00000520248 2290 ntBASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 MTND4P16-201ENST00000466108 1367 ntBASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 RNA5SP140-201ENST00000364524 92 ntBASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 Y_RNA.554-201ENST00000384672 102 ntBASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 AL590635.1-201ENST00000406314 586 ntBASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 RN7SKP229-201ENST00000410465 302 ntBASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 NRBF2P2-201ENST00000413087 861 ntBASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 MTATP6P27-201ENST00000416987 621 ntBASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 AC245054.1-201ENST00000420944 258 ntBASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 AL035458.1-201ENST00000433096 585 ntBASIC8.45□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms