Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 RN7SL810P-201ENST00000493031 276 ntBASIC2.14□□□□□ -2.07
MACF1Q9UPN3 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 AC002044.3-201ENST00000623314 541 ntBASIC2.14□□□□□ -2.07
MACF1Q9UPN3 AC003992.1-201ENST00000635364 557 ntBASIC2.14□□□□□ -2.07
MACF1Q9UPN3 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 AC015799.1-201ENST00000622996 3122 ntBASIC2.14□□□□□ -2.07
MACF1Q9UPN3 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 SNORA73.2-201ENST00000364946 201 ntBASIC2.14□□□□□ -2.07
MACF1Q9UPN3 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 AC041039.1-201ENST00000485656 536 ntBASIC2.14□□□□□ -2.07
MACF1Q9UPN3 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 GTF2F2P1-201ENST00000511083 675 ntBASIC2.14□□□□□ -2.07
MACF1Q9UPN3 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC2.14□□□□□ -2.07
MACF1Q9UPN3 MTCO1P1-201ENST00000624263 1081 ntBASIC2.14□□□□□ -2.07
MACF1Q9UPN3 DDX18P6-201ENST00000450119 1997 ntBASIC2.14□□□□□ -2.07
MACF1Q9UPN3 GOLGA3-202ENST00000450791 8870 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 ZNF471-202ENST00000591537 5859 ntTSL 2 BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 CCDC144A-206ENST00000399273 8686 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 ARID2-201ENST00000334344 8642 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 AL022722.2-201ENST00000402519 180 ntBASIC2.13□□□□□ -2.07
MACF1Q9UPN3 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 AP005403.1-201ENST00000579720 229 ntBASIC2.13□□□□□ -2.07
MACF1Q9UPN3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 AC183089.2-201ENST00000637931 916 ntBASIC2.13□□□□□ -2.07
MACF1Q9UPN3 SRCAP-202ENST00000395059 9126 ntTSL 2 BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 AC097634.1-201ENST00000604491 2467 ntBASIC2.13□□□□□ -2.07
MACF1Q9UPN3 ZNF626-203ENST00000601440 5963 ntTSL 4 BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 RNA5SP478-201ENST00000364657 115 ntBASIC2.13□□□□□ -2.07
MACF1Q9UPN3 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 AC096664.2-201ENST00000411843 406 ntBASIC2.13□□□□□ -2.07
MACF1Q9UPN3 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 AP002360.3-201ENST00000607673 710 ntBASIC2.13□□□□□ -2.07
MACF1Q9UPN3 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 TECTA-202ENST00000392793 7426 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 BIN2P1-201ENST00000504996 1530 ntBASIC2.13□□□□□ -2.07
MACF1Q9UPN3 NAP1L4P1-201ENST00000319092 1157 ntBASIC2.13□□□□□ -2.07
MACF1Q9UPN3 CRP-203ENST00000368111 512 ntTSL 3 BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 AC006994.1-201ENST00000438212 839 ntBASIC2.13□□□□□ -2.07
MACF1Q9UPN3 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 CDRT1-208ENST00000630868 794 ntBASIC2.13□□□□□ -2.07
MACF1Q9UPN3 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 CELF1-204ENST00000395290 7666 ntAPPRIS ALT1 TSL 2 BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 NSD2-212ENST00000503128 8568 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 AC025031.4-201ENST00000621248 3271 ntBASIC2.13□□□□□ -2.07
MACF1Q9UPN3 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 RPL23AP59-201ENST00000399415 461 ntBASIC2.13□□□□□ -2.07
MACF1Q9UPN3 RSU1P3-201ENST00000412878 835 ntBASIC2.13□□□□□ -2.07
MACF1Q9UPN3 GSTM5P1-201ENST00000434751 660 ntBASIC2.13□□□□□ -2.07
MACF1Q9UPN3 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 AL137843.1-201ENST00000605078 385 ntBASIC2.13□□□□□ -2.07
MACF1Q9UPN3 AL442067.2-201ENST00000614033 363 ntBASIC2.13□□□□□ -2.07
MACF1Q9UPN3 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 BX005214.3-202ENST00000619809 325 ntBASIC2.13□□□□□ -2.07
MACF1Q9UPN3 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 DNMT3A-201ENST00000264709 9501 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 OR1D2-203ENST00000641833 4887 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 DLGAP2-214ENST00000612087 10088 ntAPPRIS P2 TSL 5 BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC2.13□□□□□ -2.07
MACF1Q9UPN3 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms