Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AC022080.3-201ENST00000544433 482 ntBASIC8.11□□□□□ -1.11
LHX6Q9UPM6 AC138123.3-201ENST00000551928 791 ntTSL 5 BASIC8.11□□□□□ -1.11
LHX6Q9UPM6 AC109460.4-201ENST00000561471 454 ntTSL 3 BASIC8.11□□□□□ -1.11
LHX6Q9UPM6 AC005722.3-201ENST00000580884 446 ntTSL 3 BASIC8.11□□□□□ -1.11
LHX6Q9UPM6 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC8.11□□□□□ -1.11
LHX6Q9UPM6 OR10AB1P-201ENST00000609613 938 ntBASIC8.11□□□□□ -1.11
LHX6Q9UPM6 AL021879.1-201ENST00000611756 288 ntBASIC8.11□□□□□ -1.11
LHX6Q9UPM6 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC8.11□□□□□ -1.11
LHX6Q9UPM6 C22orf24-203ENST00000623735 1247 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
LHX6Q9UPM6 CDY4P-201ENST00000418290 1513 ntBASIC8.11□□□□□ -1.11
LHX6Q9UPM6 AC117945.2-201ENST00000642109 1521 ntBASIC8.11□□□□□ -1.11
LHX6Q9UPM6 GLRA4-201ENST00000372617 1795 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
LHX6Q9UPM6 AC020951.1-201ENST00000624361 2271 ntBASIC8.11□□□□□ -1.11
LHX6Q9UPM6 EIF4G2-232ENST00000640650 2724 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
LHX6Q9UPM6 SUPT16H-201ENST00000216297 4684 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LHX6Q9UPM6 Z83820.1-201ENST00000456978 1499 ntBASIC8.11□□□□□ -1.11
LHX6Q9UPM6 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
LHX6Q9UPM6 FNDC3A-206ENST00000541916 6328 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LHX6Q9UPM6 TCF4-224ENST00000564403 2696 ntAPPRIS ALT1 TSL 5 BASIC8.11□□□□□ -1.11
LHX6Q9UPM6 MED7-201ENST00000286317 2402 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LHX6Q9UPM6 CCDC25-201ENST00000356537 3626 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LHX6Q9UPM6 LARP1B-202ENST00000394288 2151 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
LHX6Q9UPM6 BRD7P1-201ENST00000557705 1915 ntBASIC8.11□□□□□ -1.11
LHX6Q9UPM6 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
LHX6Q9UPM6 PNMA8A-202ENST00000438932 3335 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
LHX6Q9UPM6 GTF2H2B-203ENST00000508065 1432 ntBASIC8.11□□□□□ -1.11
LHX6Q9UPM6 PPARGC1A-206ENST00000507380 2385 ntTSL 2 BASIC8.11□□□□□ -1.11
LHX6Q9UPM6 SELENOP-209ENST00000511224 1853 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LHX6Q9UPM6 GOSR2-220ENST00000638838 3266 ntAPPRIS ALT1 TSL 5 BASIC8.11□□□□□ -1.11
LHX6Q9UPM6 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LHX6Q9UPM6 SLAMF7-206ENST00000458104 2345 ntTSL 2 BASIC8.11□□□□□ -1.11
LHX6Q9UPM6 PSG8-204ENST00000406636 1610 ntTSL 2 BASIC8.11□□□□□ -1.11
LHX6Q9UPM6 PIGN-251ENST00000640876 6045 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 TBC1D3P1-DHX40P1-201ENST00000587125 1841 ntTSL 2 BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 ZNF185-212ENST00000539731 4334 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 GSDMC-201ENST00000276708 2714 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 ARHGEF9-201ENST00000253401 5413 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 SOCS4-202ENST00000395472 6779 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 ZNF726-206ENST00000594466 2473 ntTSL 5 BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 ZNF736-202ENST00000423484 7119 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 ECD-203ENST00000430082 2246 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 AC074043.1-201ENST00000483126 1776 ntBASIC8.1□□□□□ -1.11
LHX6Q9UPM6 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 PRDM10-205ENST00000526082 3308 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 LINC00547-201ENST00000612438 3314 ntTSL 2 BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 LINC01133-203ENST00000635112 1996 ntTSL 5 BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 TCF4-241ENST00000568740 2628 ntTSL 5 BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 ENPP6-201ENST00000296741 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 GLDN-202ENST00000396399 4584 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 ASPH-230ENST00000541428 2550 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 PPP2R1B-206ENST00000527614 5587 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 CAND1-208ENST00000545606 11251 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 Y_RNA.81-201ENST00000362997 102 ntBASIC8.1□□□□□ -1.11
LHX6Q9UPM6 SNORA71D-201ENST00000363484 134 ntBASIC8.1□□□□□ -1.11
LHX6Q9UPM6 Y_RNA.380-201ENST00000365663 111 ntBASIC8.1□□□□□ -1.11
LHX6Q9UPM6 RNU6-890P-201ENST00000384121 107 ntBASIC8.1□□□□□ -1.11
LHX6Q9UPM6 Y_RNA.496-201ENST00000384444 101 ntBASIC8.1□□□□□ -1.11
LHX6Q9UPM6 TANK-203ENST00000402568 878 ntTSL 5 BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 RN7SKP232-201ENST00000410170 290 ntBASIC8.1□□□□□ -1.11
LHX6Q9UPM6 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 AP001042.1-201ENST00000416842 487 ntTSL 3 BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 AC092634.6-201ENST00000418558 192 ntBASIC8.1□□□□□ -1.11
LHX6Q9UPM6 EIF4EP1-201ENST00000422311 642 ntBASIC8.1□□□□□ -1.11
LHX6Q9UPM6 AC064875.1-203ENST00000422996 582 ntTSL 4 BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 AC119618.1-201ENST00000434191 222 ntBASIC8.1□□□□□ -1.11
LHX6Q9UPM6 RPS3AP54-201ENST00000435535 734 ntBASIC8.1□□□□□ -1.11
LHX6Q9UPM6 AC013403.1-201ENST00000436954 263 ntBASIC8.1□□□□□ -1.11
LHX6Q9UPM6 AC105402.2-201ENST00000438503 358 ntBASIC8.1□□□□□ -1.11
LHX6Q9UPM6 AL645936.1-201ENST00000441979 518 ntBASIC8.1□□□□□ -1.11
LHX6Q9UPM6 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 CHIAP1-201ENST00000456220 995 ntBASIC8.1□□□□□ -1.11
LHX6Q9UPM6 AC079944.1-201ENST00000485426 495 ntBASIC8.1□□□□□ -1.11
LHX6Q9UPM6 RN7SL272P-201ENST00000487762 289 ntBASIC8.1□□□□□ -1.11
LHX6Q9UPM6 AC044787.1-201ENST00000497325 792 ntBASIC8.1□□□□□ -1.11
LHX6Q9UPM6 AC010608.1-201ENST00000507964 275 ntTSL 4 BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 B3GNTL1P1-201ENST00000509174 289 ntBASIC8.1□□□□□ -1.11
LHX6Q9UPM6 AC004062.1-201ENST00000509926 645 ntBASIC8.1□□□□□ -1.11
LHX6Q9UPM6 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 RNU6-1213P-201ENST00000517075 94 ntBASIC8.1□□□□□ -1.11
LHX6Q9UPM6 AC125612.1-201ENST00000547580 377 ntBASIC8.1□□□□□ -1.11
LHX6Q9UPM6 AC079598.4-201ENST00000549647 265 ntBASIC8.1□□□□□ -1.11
LHX6Q9UPM6 AC010542.1-201ENST00000568430 555 ntTSL 4 BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 AC121334.2-201ENST00000605387 271 ntBASIC8.1□□□□□ -1.11
LHX6Q9UPM6 AC123788.2-201ENST00000612290 283 ntBASIC8.1□□□□□ -1.11
LHX6Q9UPM6 AC027506.1-201ENST00000621395 198 ntBASIC8.1□□□□□ -1.11
LHX6Q9UPM6 AC239859.6-201ENST00000622095 213 ntBASIC8.1□□□□□ -1.11
LHX6Q9UPM6 LINC01125-248ENST00000627284 700 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 LINC01002-216ENST00000632351 572 ntTSL 5 BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 FAM9C-201ENST00000333995 3361 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 BCLAF3-203ENST00000379687 6528 ntAPPRIS P2 TSL 5 BASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 157.2 ms