Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 TCL6_3.1-201ENST00000619064 137 ntBASIC8.33□□□□□ -1.08
RIMBP3Q9UFD9 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RIMBP3Q9UFD9 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC8.33□□□□□ -1.08
RIMBP3Q9UFD9 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC8.33□□□□□ -1.08
RIMBP3Q9UFD9 PARP4P1-201ENST00000435945 2337 ntBASIC8.33□□□□□ -1.08
RIMBP3Q9UFD9 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RIMBP3Q9UFD9 RNA5SP509-201ENST00000364577 119 ntBASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 SNORA66-201ENST00000384792 133 ntBASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 PRSS3P4-201ENST00000453323 162 ntBASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 MEMO1P4-201ENST00000453590 386 ntBASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 AC092754.1-201ENST00000472975 479 ntBASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 GUCY1A2-203ENST00000526355 16205 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 LINC01616-201ENST00000561816 2280 ntBASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 AC006213.6-201ENST00000623722 4179 ntBASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 LRRC37A9P-201ENST00000603850 5376 ntBASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 AC005154.2-201ENST00000438110 379 ntBASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 AP003080.1-202ENST00000526526 915 ntBASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 OR8A2P-201ENST00000528631 952 ntBASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 AL163952.1-202ENST00000569625 600 ntBASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 H3F3BP2-201ENST00000583907 357 ntBASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RIMBP3Q9UFD9 ALMS1-204ENST00000484298 12595 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
RIMBP3Q9UFD9 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
RIMBP3Q9UFD9 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC8.31□□□□□ -1.08
RIMBP3Q9UFD9 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RIMBP3Q9UFD9 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
RIMBP3Q9UFD9 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RIMBP3Q9UFD9 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RIMBP3Q9UFD9 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RIMBP3Q9UFD9 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RIMBP3Q9UFD9 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC8.31□□□□□ -1.08
RIMBP3Q9UFD9 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RIMBP3Q9UFD9 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
RIMBP3Q9UFD9 EPPK1-202ENST00000615648 16002 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
RIMBP3Q9UFD9 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC8.31□□□□□ -1.08
RIMBP3Q9UFD9 OR1L6-202ENST00000373684 1044 ntBASIC8.31□□□□□ -1.08
RIMBP3Q9UFD9 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC8.31□□□□□ -1.08
RIMBP3Q9UFD9 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC8.31□□□□□ -1.08
RIMBP3Q9UFD9 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RIMBP3Q9UFD9 RPL34P6-201ENST00000432390 345 ntBASIC8.31□□□□□ -1.08
RIMBP3Q9UFD9 REG1CP-206ENST00000447469 496 ntBASIC8.31□□□□□ -1.08
RIMBP3Q9UFD9 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC8.31□□□□□ -1.08
RIMBP3Q9UFD9 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC8.31□□□□□ -1.08
RIMBP3Q9UFD9 SNORA59A-201ENST00000459326 152 ntBASIC8.31□□□□□ -1.08
RIMBP3Q9UFD9 AC109464.1-201ENST00000511091 819 ntBASIC8.31□□□□□ -1.08
RIMBP3Q9UFD9 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC8.31□□□□□ -1.08
RIMBP3Q9UFD9 PDCD6IPP2-207ENST00000566321 1069 ntBASIC8.31□□□□□ -1.08
RIMBP3Q9UFD9 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC8.31□□□□□ -1.08
RIMBP3Q9UFD9 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
RIMBP3Q9UFD9 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RIMBP3Q9UFD9 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
RIMBP3Q9UFD9 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
RIMBP3Q9UFD9 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RIMBP3Q9UFD9 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC8.31□□□□□ -1.08
RIMBP3Q9UFD9 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
RIMBP3Q9UFD9 PTER-201ENST00000298942 3448 ntTSL 5 BASIC8.3□□□□□ -1.08
RIMBP3Q9UFD9 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RIMBP3Q9UFD9 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC8.3□□□□□ -1.08
RIMBP3Q9UFD9 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RIMBP3Q9UFD9 AL358176.3-201ENST00000420757 454 ntBASIC8.3□□□□□ -1.08
RIMBP3Q9UFD9 OR4C10P-201ENST00000434991 931 ntBASIC8.3□□□□□ -1.08
RIMBP3Q9UFD9 OR1H1P-201ENST00000448731 937 ntBASIC8.3□□□□□ -1.08
RIMBP3Q9UFD9 RPL7AP52-201ENST00000458096 790 ntBASIC8.3□□□□□ -1.08
RIMBP3Q9UFD9 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC8.3□□□□□ -1.08
RIMBP3Q9UFD9 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC8.3□□□□□ -1.08
RIMBP3Q9UFD9 AC073358.1-201ENST00000505671 684 ntBASIC8.3□□□□□ -1.08
RIMBP3Q9UFD9 AC006499.6-201ENST00000511169 607 ntBASIC8.3□□□□□ -1.08
RIMBP3Q9UFD9 AC026726.1-201ENST00000512859 601 ntBASIC8.3□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms