Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.41□□□□□ -1.38
HDAC6Q9UBN7 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HDAC6Q9UBN7 RN7SL547P-201ENST00000490793 290 ntBASIC6.41□□□□□ -1.38
HDAC6Q9UBN7 RN7SKP288-201ENST00000516227 268 ntBASIC6.41□□□□□ -1.38
HDAC6Q9UBN7 MIR2117-201ENST00000516780 80 ntBASIC6.41□□□□□ -1.38
HDAC6Q9UBN7 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.41□□□□□ -1.38
HDAC6Q9UBN7 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.41□□□□□ -1.38
HDAC6Q9UBN7 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC6.41□□□□□ -1.38
HDAC6Q9UBN7 AC096996.1-201ENST00000563813 325 ntBASIC6.41□□□□□ -1.38
HDAC6Q9UBN7 IMMP1LP3-201ENST00000604197 224 ntBASIC6.41□□□□□ -1.38
HDAC6Q9UBN7 AL109620.1-201ENST00000618738 1197 ntBASIC6.41□□□□□ -1.38
HDAC6Q9UBN7 AC021766.1-201ENST00000624404 741 ntBASIC6.41□□□□□ -1.38
HDAC6Q9UBN7 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
HDAC6Q9UBN7 AC079776.5-201ENST00000641920 211 ntBASIC6.41□□□□□ -1.38
HDAC6Q9UBN7 AC092451.3-201ENST00000625067 1343 ntBASIC6.41□□□□□ -1.38
HDAC6Q9UBN7 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
HDAC6Q9UBN7 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.41□□□□□ -1.38
HDAC6Q9UBN7 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
HDAC6Q9UBN7 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HDAC6Q9UBN7 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HDAC6Q9UBN7 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 MFSD8-219ENST00000641228 2559 ntBASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 SNORA58B-201ENST00000364259 136 ntBASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 RNA5SP131-201ENST00000365452 119 ntBASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 AL450996.1-201ENST00000445574 1202 ntBASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 RANP1-206ENST00000455094 651 ntBASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 AC090589.1-201ENST00000473109 362 ntBASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 COPS8P2-201ENST00000473228 627 ntBASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 AC087672.1-201ENST00000479876 766 ntBASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 RPS3AP15-201ENST00000483874 781 ntBASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 COL6A4P2-205ENST00000509855 506 ntBASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 AC011270.1-201ENST00000558606 583 ntBASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 FKBP1AP1-201ENST00000594588 318 ntBASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 AC018445.2-201ENST00000622987 260 ntBASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 AC004808.2-201ENST00000627965 773 ntBASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
HDAC6Q9UBN7 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
HDAC6Q9UBN7 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.39
HDAC6Q9UBN7 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.4□□□□□ -1.39
HDAC6Q9UBN7 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
HDAC6Q9UBN7 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.39
HDAC6Q9UBN7 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
HDAC6Q9UBN7 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.4□□□□□ -1.39
HDAC6Q9UBN7 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
HDAC6Q9UBN7 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
HDAC6Q9UBN7 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.4□□□□□ -1.39
HDAC6Q9UBN7 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 C4BPAP1-201ENST00000415474 1893 ntBASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 SPTLC1P2-201ENST00000407089 121 ntBASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 AL139039.2-201ENST00000407436 479 ntBASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 MTND4LP21-201ENST00000415303 295 ntBASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 AC013268.2-201ENST00000420753 337 ntBASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 AL606490.1-201ENST00000452266 765 ntBASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 LDHBP2-201ENST00000456969 1005 ntBASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.39□□□□□ -1.39
HDAC6Q9UBN7 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms