Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 TMEM97P2-201ENST00000517841 403 ntBASIC6.45□□□□□ -1.38
TRIM39Q9HCM9 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.45□□□□□ -1.38
TRIM39Q9HCM9 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.45□□□□□ -1.38
TRIM39Q9HCM9 AL356057.1-201ENST00000533798 831 ntBASIC6.45□□□□□ -1.38
TRIM39Q9HCM9 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.45□□□□□ -1.38
TRIM39Q9HCM9 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC6.45□□□□□ -1.38
TRIM39Q9HCM9 AC015688.2-201ENST00000584523 262 ntBASIC6.45□□□□□ -1.38
TRIM39Q9HCM9 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.45□□□□□ -1.38
TRIM39Q9HCM9 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC6.45□□□□□ -1.38
TRIM39Q9HCM9 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.45□□□□□ -1.38
TRIM39Q9HCM9 AL158042.1-201ENST00000605338 460 ntBASIC6.45□□□□□ -1.38
TRIM39Q9HCM9 AC019257.2-201ENST00000605539 497 ntBASIC6.45□□□□□ -1.38
TRIM39Q9HCM9 VIS1.1-201ENST00000610517 203 ntBASIC6.45□□□□□ -1.38
TRIM39Q9HCM9 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
TRIM39Q9HCM9 AC024595.1-201ENST00000623088 387 ntBASIC6.45□□□□□ -1.38
TRIM39Q9HCM9 LGI1-209ENST00000627699 664 ntTSL 3 BASIC6.45□□□□□ -1.38
TRIM39Q9HCM9 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
TRIM39Q9HCM9 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM39Q9HCM9 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM39Q9HCM9 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.45□□□□□ -1.38
TRIM39Q9HCM9 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.45□□□□□ -1.38
TRIM39Q9HCM9 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
TRIM39Q9HCM9 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM39Q9HCM9 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM39Q9HCM9 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
TRIM39Q9HCM9 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
TRIM39Q9HCM9 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.45□□□□□ -1.38
TRIM39Q9HCM9 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM39Q9HCM9 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.45□□□□□ -1.38
TRIM39Q9HCM9 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
TRIM39Q9HCM9 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 AC007159.1-201ENST00000566529 4706 ntBASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 ENSAP3-201ENST00000312710 333 ntBASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 FAM133CP-201ENST00000332869 704 ntBASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 NACA3P-201ENST00000359690 648 ntBASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 RNU6-353P-201ENST00000364266 108 ntBASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 MIR525-201ENST00000384978 85 ntBASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 RN7SKP129-201ENST00000410288 299 ntBASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 OR4K6P-201ENST00000416478 897 ntBASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 AL360013.1-201ENST00000419031 858 ntBASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 CYCSP52-201ENST00000422857 310 ntBASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 MTCO1P52-201ENST00000433928 531 ntBASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 AC003989.1-201ENST00000434569 565 ntBASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 AC104978.1-201ENST00000449387 391 ntBASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 NPM1P13-201ENST00000452663 865 ntBASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 RNU7-140P-201ENST00000459546 60 ntBASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 AC021193.1-201ENST00000511607 420 ntBASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 AC138938.1-201ENST00000515431 782 ntBASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 IGLV3-6-201ENST00000523937 250 ntBASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 MTND2P26-201ENST00000528255 1029 ntBASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 OR52K3P-201ENST00000531655 943 ntBASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 AC023968.1-201ENST00000560719 475 ntBASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 SS18L2P2-201ENST00000583960 235 ntBASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 VN1R83P-201ENST00000595685 445 ntBASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 AC010620.1-201ENST00000601088 1102 ntBASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 AC015726.1-201ENST00000602353 681 ntBASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 MRPS35P3-201ENST00000603189 709 ntBASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 HIRAP1-201ENST00000605318 787 ntBASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 AL583856.2-201ENST00000606298 543 ntBASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 AC010245.2-201ENST00000606908 1167 ntBASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 AL139407.1-201ENST00000613826 1175 ntBASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 AC139769.3-201ENST00000618383 175 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms