Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 SNHG20-202ENST00000434411 2143 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 PLEKHB2-201ENST00000234115 4208 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 BTBD7-202ENST00000334746 8430 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 LGALS8-212ENST00000450372 6281 ntAPPRIS P4 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 C1orf147-201ENST00000367119 2096 ntTSL 2 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 WARS2-IT1-201ENST00000423984 2060 ntTSL 2 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 FAIM2-205ENST00000550890 2094 ntTSL 2 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 EPC1-202ENST00000319778 4057 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 CPA6-201ENST00000297770 2002 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 SIDT2-203ENST00000431081 3910 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 AARS2-201ENST00000244571 3854 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 USP28-205ENST00000537706 1900 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 TADA2A-202ENST00000612272 1948 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 MAPK10-365ENST00000641902 3825 ntBASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 SYNE1-237ENST00000539504 3768 ntTSL 5 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 CAMKK2-216ENST00000545538 3797 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 ARF1-201ENST00000272102 1888 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 TRAF3IP3-205ENST00000400959 1854 ntTSL 5 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 AL353597.3-201ENST00000624365 3745 ntBASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 SDK2-201ENST00000392650 10723 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 AC110373.1-201ENST00000505994 3505 ntBASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 MAP3K9-202ENST00000553414 3544 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 NUP62-202ENST00000422090 3479 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 PHTF2-205ENST00000416283 5198 ntTSL 5 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 RBM23-205ENST00000542016 1743 ntTSL 2 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 SLC1A7-205ENST00000620288 3378 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 ANXA2-202ENST00000396024 1676 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 ZNF879-201ENST00000444149 3304 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 DDIAS-207ENST00000528759 3278 ntTSL 2 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 GSG1-203ENST00000396302 1628 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 SLCO2B1-204ENST00000454962 3219 ntTSL 2 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 HNF4A-209ENST00000619550 4763 ntTSL 5 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 RNF152-201ENST00000312828 9501 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 PIBF1-201ENST00000326291 3154 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 GJA5-203ENST00000621517 3183 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 SPTAN1-202ENST00000372731 7889 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 KLHL30-AS1-201ENST00000623136 3106 ntBASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 GUCY1A3-207ENST00000511108 2992 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 CLNS1A-204ENST00000525428 2993 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 BEAN1-207ENST00000564819 2929 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 DCAF5-202ENST00000389997 2837 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 ZNF527-202ENST00000436120 2828 ntAPPRIS P1 TSL 4 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 VPS45-202ENST00000369130 2790 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 ZNF627-204ENST00000588174 2755 ntTSL 2 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 LRRC52-201ENST00000294818 1369 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 GOT1L1-201ENST00000307599 1378 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 BTBD10P1-201ENST00000549824 1352 ntBASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 CR769775.4-201ENST00000638516 4139 ntBASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 TSPAN14-206ENST00000372164 5476 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 CENPO-201ENST00000260662 4085 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 RBFOX1-202ENST00000340209 4099 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 TTLL7-201ENST00000260505 7976 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 POLR3A-201ENST00000372371 6640 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 EEF1GP5-201ENST00000434365 1310 ntBASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 SLC43A3-202ENST00000395123 2619 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 AC104083.1-201ENST00000569449 2615 ntBASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 OTUB2-201ENST00000203664 3922 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 AC022031.1-201ENST00000585985 2593 ntBASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 LSM3-201ENST00000306024 3815 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 DNM1P46-201ENST00000341853 3831 ntTSL 2 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 AL731537.1-201ENST00000343087 421 ntTSL 3 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 TP53-202ENST00000359597 1152 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 Y_RNA.25-201ENST00000362528 102 ntBASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 RNU6-1301P-201ENST00000362724 104 ntBASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 Y_RNA.96-201ENST00000363092 109 ntBASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 RNU6-1066P-201ENST00000363573 105 ntBASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 Y_RNA.190-201ENST00000363964 101 ntBASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 RNU6-289P-201ENST00000364093 107 ntBASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 RNU6-879P-201ENST00000364328 108 ntBASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 RNU6-1305P-201ENST00000364353 104 ntBASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 RN7SKP78-201ENST00000364711 318 ntBASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 RNU6-1329P-201ENST00000365664 107 ntBASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 AZIN2-202ENST00000373440 616 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 MIR194-2-201ENST00000384864 85 ntBASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 RNU6-550P-201ENST00000391057 101 ntBASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 RNU6-1250P-201ENST00000391218 107 ntBASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 PHBP1-201ENST00000392260 808 ntBASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 ALDOAP2-201ENST00000398050 1076 ntBASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 AL355297.1-201ENST00000402808 388 ntBASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 C22orf23-202ENST00000403026 765 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 SFXN5-202ENST00000410065 840 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 Y_RNA.601-201ENST00000410500 113 ntBASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 RNU6-1190P-201ENST00000410811 104 ntBASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 AC009319.1-201ENST00000411493 754 ntBASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 IGKV3D-15-201ENST00000417279 396 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 BTF3P4-201ENST00000418852 495 ntBASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 RPL24P2-201ENST00000421023 475 ntBASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 AL359633.1-201ENST00000421403 310 ntBASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 GHRL-203ENST00000422159 401 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms