Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.97□□□□□ -1.29
ABCA3Q99758 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.97□□□□□ -1.29
ABCA3Q99758 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.97□□□□□ -1.29
ABCA3Q99758 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.97□□□□□ -1.29
ABCA3Q99758 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ABCA3Q99758 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
ABCA3Q99758 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
ABCA3Q99758 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC6.97□□□□□ -1.29
ABCA3Q99758 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC6.97□□□□□ -1.29
ABCA3Q99758 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.97□□□□□ -1.29
ABCA3Q99758 AC100757.1-201ENST00000616872 1835 ntBASIC6.97□□□□□ -1.29
ABCA3Q99758 HSPD1P8-201ENST00000400121 1658 ntBASIC6.97□□□□□ -1.29
ABCA3Q99758 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
ABCA3Q99758 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.29
ABCA3Q99758 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
ABCA3Q99758 DHX40P1-201ENST00000588725 1412 ntBASIC6.96□□□□□ -1.29
ABCA3Q99758 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
ABCA3Q99758 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.96□□□□□ -1.29
ABCA3Q99758 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
ABCA3Q99758 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
ABCA3Q99758 RNU4-25P-201ENST00000410569 230 ntBASIC6.96□□□□□ -1.29
ABCA3Q99758 GTF2IP5-201ENST00000414608 731 ntBASIC6.96□□□□□ -1.29
ABCA3Q99758 MTCYBP21-201ENST00000443300 1113 ntBASIC6.96□□□□□ -1.29
ABCA3Q99758 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.96□□□□□ -1.29
ABCA3Q99758 AC006427.1-201ENST00000514359 712 ntBASIC6.96□□□□□ -1.29
ABCA3Q99758 MIR4675-201ENST00000577898 77 ntBASIC6.96□□□□□ -1.29
ABCA3Q99758 MIR3160-1-201ENST00000577972 85 ntBASIC6.96□□□□□ -1.29
ABCA3Q99758 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC6.96□□□□□ -1.29
ABCA3Q99758 MYLK-221ENST00000583087 678 ntTSL 4 BASIC6.96□□□□□ -1.29
ABCA3Q99758 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.96□□□□□ -1.29
ABCA3Q99758 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.29
ABCA3Q99758 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC6.96□□□□□ -1.3
ABCA3Q99758 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
ABCA3Q99758 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.96□□□□□ -1.3
ABCA3Q99758 AC006058.1-201ENST00000568686 5067 ntBASIC6.96□□□□□ -1.3
ABCA3Q99758 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
ABCA3Q99758 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.96□□□□□ -1.3
ABCA3Q99758 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
ABCA3Q99758 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.96□□□□□ -1.3
ABCA3Q99758 AC091046.3-201ENST00000631455 1574 ntBASIC6.96□□□□□ -1.3
ABCA3Q99758 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
ABCA3Q99758 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.96□□□□□ -1.3
ABCA3Q99758 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
ABCA3Q99758 AL359715.3-201ENST00000569267 2123 ntBASIC6.96□□□□□ -1.3
ABCA3Q99758 AC022164.1-201ENST00000568767 2673 ntBASIC6.96□□□□□ -1.3
ABCA3Q99758 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
ABCA3Q99758 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
ABCA3Q99758 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
ABCA3Q99758 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
ABCA3Q99758 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
ABCA3Q99758 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC6.96□□□□□ -1.3
ABCA3Q99758 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.96□□□□□ -1.3
ABCA3Q99758 SNORA66-201ENST00000384792 133 ntBASIC6.96□□□□□ -1.3
ABCA3Q99758 MIR600-201ENST00000385007 98 ntBASIC6.96□□□□□ -1.3
ABCA3Q99758 RSU1P3-201ENST00000412878 835 ntBASIC6.96□□□□□ -1.3
ABCA3Q99758 MRPS21P2-201ENST00000424704 264 ntBASIC6.96□□□□□ -1.3
ABCA3Q99758 AC004975.1-201ENST00000428733 208 ntBASIC6.96□□□□□ -1.3
ABCA3Q99758 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.96□□□□□ -1.3
ABCA3Q99758 SNORD125-201ENST00000459538 96 ntBASIC6.96□□□□□ -1.3
ABCA3Q99758 RN7SL814P-201ENST00000487715 300 ntBASIC6.96□□□□□ -1.3
ABCA3Q99758 AC025674.1-201ENST00000507074 324 ntBASIC6.96□□□□□ -1.3
ABCA3Q99758 MRPS33P2-201ENST00000507850 322 ntBASIC6.96□□□□□ -1.3
ABCA3Q99758 SCARNA20.4-201ENST00000516969 131 ntBASIC6.96□□□□□ -1.3
ABCA3Q99758 AP002981.1-201ENST00000517692 975 ntBASIC6.96□□□□□ -1.3
ABCA3Q99758 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC6.96□□□□□ -1.3
ABCA3Q99758 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.96□□□□□ -1.3
ABCA3Q99758 MIR4277-201ENST00000578298 84 ntBASIC6.96□□□□□ -1.3
ABCA3Q99758 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.96□□□□□ -1.3
ABCA3Q99758 AC011933.2-201ENST00000578539 2790 ntBASIC6.96□□□□□ -1.3
ABCA3Q99758 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.95□□□□□ -1.3
ABCA3Q99758 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
ABCA3Q99758 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
ABCA3Q99758 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
ABCA3Q99758 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC6.95□□□□□ -1.3
ABCA3Q99758 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
ABCA3Q99758 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
ABCA3Q99758 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.95□□□□□ -1.3
ABCA3Q99758 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
ABCA3Q99758 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
ABCA3Q99758 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
ABCA3Q99758 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.95□□□□□ -1.3
ABCA3Q99758 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.95□□□□□ -1.3
ABCA3Q99758 GTF2IP2-201ENST00000424290 697 ntBASIC6.95□□□□□ -1.3
ABCA3Q99758 AC103987.1-201ENST00000473394 348 ntBASIC6.95□□□□□ -1.3
ABCA3Q99758 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC6.95□□□□□ -1.3
ABCA3Q99758 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC6.95□□□□□ -1.3
ABCA3Q99758 DERA-209ENST00000532964 854 ntTSL 5 BASIC6.95□□□□□ -1.3
ABCA3Q99758 AC008147.3-201ENST00000548666 354 ntBASIC6.95□□□□□ -1.3
ABCA3Q99758 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.95□□□□□ -1.3
ABCA3Q99758 AL683813.2-201ENST00000605245 502 ntBASIC6.95□□□□□ -1.3
ABCA3Q99758 AC011944.2-201ENST00000624440 683 ntBASIC6.95□□□□□ -1.3
ABCA3Q99758 AC016717.3-201ENST00000624730 554 ntBASIC6.95□□□□□ -1.3
ABCA3Q99758 CR381572.2-201ENST00000624852 397 ntBASIC6.95□□□□□ -1.3
ABCA3Q99758 AC068724.3-201ENST00000625906 87 ntBASIC6.95□□□□□ -1.3
ABCA3Q99758 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC6.95□□□□□ -1.3
ABCA3Q99758 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.95□□□□□ -1.3
ABCA3Q99758 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
ABCA3Q99758 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
ABCA3Q99758 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
ABCA3Q99758 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms