Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 TNFAIP8-206ENST00000504771 8681 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 GPR156-203ENST00000464295 4442 ntAPPRIS P3 TSL 5 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 NTRK2-204ENST00000359847 6646 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 ABCB4-203ENST00000359206 3923 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 GSN-AS1-201ENST00000414544 4763 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 FAM172A-201ENST00000395965 4312 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 ZNF259P1-202ENST00000572422 4912 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 FBXO38-203ENST00000394370 4132 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 ANKRD36P1-201ENST00000344424 659 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 RN7SKP281-201ENST00000410472 352 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 OR6C66P-201ENST00000414917 930 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AC019050.1-201ENST00000418508 492 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AC234781.2-201ENST00000426370 994 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 MED28P3-201ENST00000444288 531 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 IGKV1OR2-2-201ENST00000451163 355 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 ZNF736P8Y-201ENST00000451913 669 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 RPS3AP41-201ENST00000462701 778 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AC112198.1-201ENST00000505369 1220 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AC021146.10-201ENST00000515628 706 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AL109620.1-201ENST00000618738 1197 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AC005840.5-201ENST00000619166 599 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AC135068.12-201ENST00000637370 931 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 TCF7L2-216ENST00000534894 3778 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 ALB-202ENST00000401494 1659 ntTSL 5 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 PDLIM5-201ENST00000317968 6083 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 ZNF304-202ENST00000391705 4313 ntAPPRIS P3 TSL 5 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 NRP1-212ENST00000432372 4137 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 RTN3-202ENST00000339997 4886 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 NAA16-201ENST00000379406 4347 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 SETDB2-203ENST00000354234 6139 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 RACGAP1P-201ENST00000550663 1879 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 PAICS-207ENST00000512576 6480 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 NUMA1-232ENST00000613205 3940 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 TRAK2-201ENST00000332624 6510 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 SNORD50B-201ENST00000364995 70 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 RPL17P17-201ENST00000419491 557 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 ZDHHC20P1-204ENST00000435787 423 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 OR51P1P-201ENST00000447547 942 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 MTND6P8-201ENST00000503471 522 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AC091951.3-201ENST00000504093 246 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AC079140.5-201ENST00000507882 310 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 RNU6-1333P-201ENST00000516162 93 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 MTND2P17-201ENST00000550281 688 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AC084033.3-201ENST00000551421 451 ntTSL 2 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AC106782.4-201ENST00000568264 210 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 GAS5-AS1-201ENST00000602767 694 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AC092747.3-201ENST00000603769 301 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AC055876.5-201ENST00000605667 259 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AC016877.3-201ENST00000606778 504 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 Z98200.1-201ENST00000607298 470 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 MALAT1-208ENST00000616527 572 ntTSL 3 BASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AC015726.2-201ENST00000620112 122 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 AC026336.5-201ENST00000624455 738 ntBASIC1.96□□□□□ -2.1
HMCN1Q96RW7 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms