Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.79□□□□□ -1.64
ACTBP60709 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.79□□□□□ -1.64
ACTBP60709 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC4.79□□□□□ -1.64
ACTBP60709 AP003396.4-201ENST00000527574 265 ntBASIC4.79□□□□□ -1.64
ACTBP60709 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC4.79□□□□□ -1.64
ACTBP60709 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.79□□□□□ -1.64
ACTBP60709 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.79□□□□□ -1.64
ACTBP60709 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
ACTBP60709 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
ACTBP60709 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.79□□□□□ -1.64
ACTBP60709 AC124856.1-201ENST00000600819 896 ntBASIC4.79□□□□□ -1.64
ACTBP60709 AC009779.8-202ENST00000607990 932 ntBASIC4.79□□□□□ -1.64
ACTBP60709 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.79□□□□□ -1.64
ACTBP60709 AC090607.5-201ENST00000615692 224 ntBASIC4.79□□□□□ -1.64
ACTBP60709 AC073592.6-201ENST00000624271 415 ntBASIC4.79□□□□□ -1.64
ACTBP60709 AC103703.1-201ENST00000634783 663 ntBASIC4.79□□□□□ -1.64
ACTBP60709 OR11H2-202ENST00000641517 1085 ntBASIC4.79□□□□□ -1.64
ACTBP60709 SAMMSON-227ENST00000642114 1199 ntBASIC4.79□□□□□ -1.64
ACTBP60709 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ACTBP60709 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.79□□□□□ -1.64
ACTBP60709 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ACTBP60709 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.79□□□□□ -1.64
ACTBP60709 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ACTBP60709 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
ACTBP60709 LINC01963-201ENST00000562038 3148 ntBASIC4.79□□□□□ -1.64
ACTBP60709 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
ACTBP60709 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.79□□□□□ -1.64
ACTBP60709 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
ACTBP60709 AC021242.1-201ENST00000507315 2035 ntBASIC4.79□□□□□ -1.64
ACTBP60709 AL354854.1-201ENST00000455940 1363 ntBASIC4.78□□□□□ -1.64
ACTBP60709 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
ACTBP60709 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ACTBP60709 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
ACTBP60709 AC004817.4-201ENST00000602396 3625 ntBASIC4.78□□□□□ -1.64
ACTBP60709 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ACTBP60709 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.78□□□□□ -1.64
ACTBP60709 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.78□□□□□ -1.64
ACTBP60709 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ACTBP60709 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ACTBP60709 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.78□□□□□ -1.64
ACTBP60709 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
ACTBP60709 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
ACTBP60709 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ACTBP60709 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
ACTBP60709 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
ACTBP60709 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
ACTBP60709 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
ACTBP60709 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
ACTBP60709 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ACTBP60709 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
ACTBP60709 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
ACTBP60709 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
ACTBP60709 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ACTBP60709 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ACTBP60709 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
ACTBP60709 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ACTBP60709 PCNPP4-201ENST00000414817 517 ntBASIC4.78□□□□□ -1.64
ACTBP60709 PLA2G12AP2-201ENST00000424744 264 ntBASIC4.78□□□□□ -1.64
ACTBP60709 HSPD1P12-201ENST00000429127 1069 ntBASIC4.78□□□□□ -1.64
ACTBP60709 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC4.78□□□□□ -1.64
ACTBP60709 ATP5LP2-201ENST00000440646 311 ntBASIC4.78□□□□□ -1.64
ACTBP60709 AL136455.1-201ENST00000441083 1240 ntBASIC4.78□□□□□ -1.64
ACTBP60709 AC068228.1-201ENST00000461723 211 ntBASIC4.78□□□□□ -1.64
ACTBP60709 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.78□□□□□ -1.64
ACTBP60709 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC4.78□□□□□ -1.64
ACTBP60709 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC4.78□□□□□ -1.64
ACTBP60709 GAPDHP71-201ENST00000511530 1003 ntBASIC4.78□□□□□ -1.64
ACTBP60709 RN7SKP253-201ENST00000516424 309 ntBASIC4.78□□□□□ -1.64
ACTBP60709 RN7SKP238-201ENST00000516483 249 ntBASIC4.78□□□□□ -1.64
ACTBP60709 AC011853.1-201ENST00000518911 454 ntBASIC4.78□□□□□ -1.64
ACTBP60709 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.78□□□□□ -1.64
ACTBP60709 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC4.78□□□□□ -1.64
ACTBP60709 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ACTBP60709 AP002373.2-201ENST00000541631 1060 ntBASIC4.78□□□□□ -1.64
ACTBP60709 RPA2P1-201ENST00000556557 721 ntBASIC4.78□□□□□ -1.64
ACTBP60709 AC091078.2-201ENST00000557145 559 ntBASIC4.78□□□□□ -1.64
ACTBP60709 AC026826.3-201ENST00000561747 158 ntBASIC4.78□□□□□ -1.64
ACTBP60709 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC4.78□□□□□ -1.64
ACTBP60709 MIR4675-201ENST00000577898 77 ntBASIC4.78□□□□□ -1.64
ACTBP60709 H3F3BP2-201ENST00000583907 357 ntBASIC4.78□□□□□ -1.64
ACTBP60709 TEX41-218ENST00000596540 882 ntTSL 5 BASIC4.78□□□□□ -1.64
ACTBP60709 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC4.78□□□□□ -1.64
ACTBP60709 AP001437.1-201ENST00000608783 456 ntBASIC4.78□□□□□ -1.64
ACTBP60709 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.78□□□□□ -1.64
ACTBP60709 MIR7109-201ENST00000613748 65 ntBASIC4.78□□□□□ -1.64
ACTBP60709 AC245014.3-201ENST00000618589 347 ntBASIC4.78□□□□□ -1.64
ACTBP60709 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ACTBP60709 AL596275.2-207ENST00000641188 675 ntBASIC4.78□□□□□ -1.64
ACTBP60709 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
ACTBP60709 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ACTBP60709 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
ACTBP60709 AL162456.1-201ENST00000634535 2006 ntBASIC4.78□□□□□ -1.64
ACTBP60709 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC4.78□□□□□ -1.64
ACTBP60709 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.78□□□□□ -1.64
ACTBP60709 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
ACTBP60709 RLIMP2-201ENST00000427891 1563 ntBASIC4.78□□□□□ -1.64
ACTBP60709 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ACTBP60709 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ACTBP60709 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
ACTBP60709 PSG10P-201ENST00000501199 1500 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms