Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.67□□□□□ -1.5
CDH6P55285 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.67□□□□□ -1.5
CDH6P55285 PPIAP19-201ENST00000486414 492 ntBASIC5.67□□□□□ -1.5
CDH6P55285 AC105420.1-201ENST00000504389 582 ntBASIC5.67□□□□□ -1.5
CDH6P55285 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.67□□□□□ -1.5
CDH6P55285 AC109464.1-201ENST00000511091 819 ntBASIC5.67□□□□□ -1.5
CDH6P55285 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.67□□□□□ -1.5
CDH6P55285 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.67□□□□□ -1.5
CDH6P55285 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.67□□□□□ -1.5
CDH6P55285 TMEM97P2-201ENST00000517841 403 ntBASIC5.67□□□□□ -1.5
CDH6P55285 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.67□□□□□ -1.5
CDH6P55285 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.67□□□□□ -1.5
CDH6P55285 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.67□□□□□ -1.5
CDH6P55285 OR8G3P-201ENST00000533406 921 ntBASIC5.67□□□□□ -1.5
CDH6P55285 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDH6P55285 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.67□□□□□ -1.5
CDH6P55285 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.67□□□□□ -1.5
CDH6P55285 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.67□□□□□ -1.5
CDH6P55285 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CDH6P55285 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.67□□□□□ -1.5
CDH6P55285 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDH6P55285 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.67□□□□□ -1.5
CDH6P55285 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDH6P55285 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
CDH6P55285 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDH6P55285 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDH6P55285 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.66□□□□□ -1.5
CDH6P55285 AC116158.1-201ENST00000560231 2129 ntBASIC5.66□□□□□ -1.5
CDH6P55285 CDY11P-201ENST00000447168 1651 ntBASIC5.66□□□□□ -1.5
CDH6P55285 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH6P55285 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH6P55285 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.66□□□□□ -1.5
CDH6P55285 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH6P55285 NLRP3P1-201ENST00000622303 1785 ntBASIC5.66□□□□□ -1.5
CDH6P55285 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.66□□□□□ -1.5
CDH6P55285 TMSB4XP4-201ENST00000323496 618 ntBASIC5.66□□□□□ -1.5
CDH6P55285 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.66□□□□□ -1.5
CDH6P55285 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH6P55285 GPS2P1-201ENST00000411761 986 ntBASIC5.66□□□□□ -1.5
CDH6P55285 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.66□□□□□ -1.5
CDH6P55285 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.66□□□□□ -1.5
CDH6P55285 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.66□□□□□ -1.5
CDH6P55285 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.66□□□□□ -1.5
CDH6P55285 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.66□□□□□ -1.5
CDH6P55285 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.66□□□□□ -1.5
CDH6P55285 AC074087.1-201ENST00000512059 724 ntBASIC5.66□□□□□ -1.5
CDH6P55285 MTND6P2-201ENST00000512226 524 ntBASIC5.66□□□□□ -1.5
CDH6P55285 SCARNA20.4-201ENST00000516969 131 ntBASIC5.66□□□□□ -1.5
CDH6P55285 RN7SKP99-201ENST00000517028 307 ntBASIC5.66□□□□□ -1.5
CDH6P55285 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CDH6P55285 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.66□□□□□ -1.5
CDH6P55285 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.66□□□□□ -1.5
CDH6P55285 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.66□□□□□ -1.5
CDH6P55285 OR11H3P-201ENST00000554547 982 ntBASIC5.66□□□□□ -1.5
CDH6P55285 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.66□□□□□ -1.5
CDH6P55285 MIR3614-201ENST00000581261 86 ntBASIC5.66□□□□□ -1.5
CDH6P55285 AC108738.1-201ENST00000603703 237 ntBASIC5.66□□□□□ -1.5
CDH6P55285 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.66□□□□□ -1.5
CDH6P55285 AC132068.1-201ENST00000623805 459 ntBASIC5.66□□□□□ -1.5
CDH6P55285 AC135068.5-201ENST00000624197 983 ntBASIC5.66□□□□□ -1.5
CDH6P55285 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.66□□□□□ -1.5
CDH6P55285 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.66□□□□□ -1.5
CDH6P55285 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDH6P55285 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CDH6P55285 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH6P55285 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH6P55285 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH6P55285 AL353796.1-201ENST00000561542 3241 ntBASIC5.66□□□□□ -1.5
CDH6P55285 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
CDH6P55285 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH6P55285 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.66□□□□□ -1.5
CDH6P55285 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH6P55285 PROS2P-201ENST00000474651 1951 ntBASIC5.66□□□□□ -1.5
CDH6P55285 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDH6P55285 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDH6P55285 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDH6P55285 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CDH6P55285 SNORA16A-201ENST00000384342 137 ntBASIC5.65□□□□□ -1.5
CDH6P55285 RNA5SP178-201ENST00000410380 128 ntBASIC5.65□□□□□ -1.5
CDH6P55285 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.65□□□□□ -1.5
CDH6P55285 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.65□□□□□ -1.5
CDH6P55285 AC104843.2-201ENST00000427666 297 ntBASIC5.65□□□□□ -1.5
CDH6P55285 GAPDHP34-201ENST00000432112 823 ntBASIC5.65□□□□□ -1.5
CDH6P55285 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.65□□□□□ -1.5
CDH6P55285 RPL12P11-201ENST00000439970 501 ntBASIC5.65□□□□□ -1.5
CDH6P55285 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.65□□□□□ -1.5
CDH6P55285 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.65□□□□□ -1.5
CDH6P55285 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.65□□□□□ -1.5
CDH6P55285 RPS27AP2-201ENST00000457576 465 ntBASIC5.65□□□□□ -1.5
CDH6P55285 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CDH6P55285 RPL12P24-201ENST00000474907 486 ntBASIC5.65□□□□□ -1.5
CDH6P55285 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.65□□□□□ -1.5
CDH6P55285 IGBP1P4-201ENST00000503202 879 ntBASIC5.65□□□□□ -1.5
CDH6P55285 MTATP6P1-201ENST00000514057 681 ntBASIC5.65□□□□□ -1.5
CDH6P55285 HMGN1P9-201ENST00000515212 298 ntBASIC5.65□□□□□ -1.5
CDH6P55285 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.65□□□□□ -1.5
CDH6P55285 AC027026.1-201ENST00000532323 742 ntBASIC5.65□□□□□ -1.5
CDH6P55285 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.65□□□□□ -1.5
CDH6P55285 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.65□□□□□ -1.5
CDH6P55285 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms