Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 RNU1-122P-201ENST00000365538 156 ntBASIC7.24□□□□□ -1.25
EPHA4P54764 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
EPHA4P54764 RNU6-1122P-201ENST00000384449 107 ntBASIC7.24□□□□□ -1.25
EPHA4P54764 MIR498-201ENST00000385134 124 ntBASIC7.24□□□□□ -1.25
EPHA4P54764 RPS24P12-201ENST00000402084 394 ntBASIC7.24□□□□□ -1.25
EPHA4P54764 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC7.24□□□□□ -1.25
EPHA4P54764 AC083875.1-201ENST00000419509 405 ntBASIC7.24□□□□□ -1.25
EPHA4P54764 SDCBPP3-201ENST00000419629 891 ntBASIC7.24□□□□□ -1.25
EPHA4P54764 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC7.24□□□□□ -1.25
EPHA4P54764 FTO-202ENST00000431610 707 ntTSL 3 BASIC7.24□□□□□ -1.25
EPHA4P54764 BMS1P19-201ENST00000433925 393 ntBASIC7.24□□□□□ -1.25
EPHA4P54764 AL954705.1-201ENST00000435277 559 ntBASIC7.24□□□□□ -1.25
EPHA4P54764 AC104850.1-201ENST00000435940 476 ntBASIC7.24□□□□□ -1.25
EPHA4P54764 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC7.24□□□□□ -1.25
EPHA4P54764 LDHAP2-201ENST00000437325 985 ntBASIC7.24□□□□□ -1.25
EPHA4P54764 AL451074.3-201ENST00000437709 472 ntBASIC7.24□□□□□ -1.25
EPHA4P54764 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC7.24□□□□□ -1.25
EPHA4P54764 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC7.24□□□□□ -1.25
EPHA4P54764 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC7.24□□□□□ -1.25
EPHA4P54764 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC7.24□□□□□ -1.25
EPHA4P54764 SS18L2P1-201ENST00000445923 213 ntBASIC7.24□□□□□ -1.25
EPHA4P54764 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC7.24□□□□□ -1.25
EPHA4P54764 BX322784.1-201ENST00000455793 1077 ntBASIC7.24□□□□□ -1.25
EPHA4P54764 AC092757.1-201ENST00000467293 467 ntBASIC7.24□□□□□ -1.25
EPHA4P54764 RBM43P1-201ENST00000476891 1081 ntBASIC7.24□□□□□ -1.25
EPHA4P54764 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC7.24□□□□□ -1.25
EPHA4P54764 HMGB1P29-201ENST00000505659 499 ntBASIC7.24□□□□□ -1.25
EPHA4P54764 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC7.24□□□□□ -1.25
EPHA4P54764 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC7.24□□□□□ -1.25
EPHA4P54764 MTND5P4-201ENST00000514978 288 ntBASIC7.24□□□□□ -1.25
EPHA4P54764 Y_RNA.675-201ENST00000516389 149 ntBASIC7.24□□□□□ -1.25
EPHA4P54764 MTND1P35-201ENST00000526739 508 ntBASIC7.24□□□□□ -1.25
EPHA4P54764 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC7.24□□□□□ -1.25
EPHA4P54764 AP004607.5-201ENST00000532034 217 ntBASIC7.24□□□□□ -1.25
EPHA4P54764 AC125611.2-201ENST00000551907 647 ntBASIC7.24□□□□□ -1.25
EPHA4P54764 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC7.24□□□□□ -1.25
EPHA4P54764 DYNLL1P1-201ENST00000595442 269 ntBASIC7.24□□□□□ -1.25
EPHA4P54764 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC7.24□□□□□ -1.25
EPHA4P54764 AC007363.1-201ENST00000604736 620 ntBASIC7.24□□□□□ -1.25
EPHA4P54764 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC7.24□□□□□ -1.25
EPHA4P54764 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC7.24□□□□□ -1.25
EPHA4P54764 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
EPHA4P54764 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC7.24□□□□□ -1.25
EPHA4P54764 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC7.24□□□□□ -1.25
EPHA4P54764 SNORA43.5-201ENST00000631270 138 ntBASIC7.24□□□□□ -1.25
EPHA4P54764 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC7.24□□□□□ -1.25
EPHA4P54764 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
EPHA4P54764 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
EPHA4P54764 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC7.24□□□□□ -1.25
EPHA4P54764 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
EPHA4P54764 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
EPHA4P54764 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
EPHA4P54764 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
EPHA4P54764 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
EPHA4P54764 AC006026.1-201ENST00000444025 1803 ntBASIC7.24□□□□□ -1.25
EPHA4P54764 AL136298.2-201ENST00000556497 1570 ntBASIC7.24□□□□□ -1.25
EPHA4P54764 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC7.24□□□□□ -1.25
EPHA4P54764 IL18RAP-202ENST00000409369 1890 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
EPHA4P54764 AC046144.1-201ENST00000478559 1853 ntBASIC7.24□□□□□ -1.25
EPHA4P54764 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
EPHA4P54764 SF3A3P1-201ENST00000446317 1477 ntBASIC7.24□□□□□ -1.25
EPHA4P54764 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC7.23□□□□□ -1.25
EPHA4P54764 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
EPHA4P54764 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
EPHA4P54764 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
EPHA4P54764 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
EPHA4P54764 ATM-215ENST00000530958 5718 ntTSL 2 BASIC7.23□□□□□ -1.25
EPHA4P54764 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC7.23□□□□□ -1.25
EPHA4P54764 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC7.23□□□□□ -1.25
EPHA4P54764 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
EPHA4P54764 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
EPHA4P54764 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
EPHA4P54764 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC7.23□□□□□ -1.25
EPHA4P54764 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC7.23□□□□□ -1.25
EPHA4P54764 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
EPHA4P54764 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
EPHA4P54764 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
EPHA4P54764 HIST1H4F-201ENST00000244537 312 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
EPHA4P54764 FAM32BP-201ENST00000344033 333 ntBASIC7.23□□□□□ -1.25
EPHA4P54764 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC7.23□□□□□ -1.25
EPHA4P54764 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
EPHA4P54764 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
EPHA4P54764 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
EPHA4P54764 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
EPHA4P54764 RNU6-532P-201ENST00000384318 107 ntBASIC7.23□□□□□ -1.25
EPHA4P54764 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC7.23□□□□□ -1.25
EPHA4P54764 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC7.23□□□□□ -1.25
EPHA4P54764 AL513174.1-201ENST00000423182 629 ntBASIC7.23□□□□□ -1.25
EPHA4P54764 AL157884.1-201ENST00000424561 454 ntBASIC7.23□□□□□ -1.25
EPHA4P54764 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.23□□□□□ -1.25
EPHA4P54764 AL512605.1-202ENST00000441919 381 ntBASIC7.23□□□□□ -1.25
EPHA4P54764 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
EPHA4P54764 MTND1P18-201ENST00000448191 573 ntBASIC7.23□□□□□ -1.25
EPHA4P54764 RN7SL688P-201ENST00000471754 275 ntBASIC7.23□□□□□ -1.25
EPHA4P54764 AC005550.2-201ENST00000476382 318 ntBASIC7.23□□□□□ -1.25
EPHA4P54764 AC021678.1-201ENST00000505195 936 ntBASIC7.23□□□□□ -1.25
EPHA4P54764 RNU6-1153P-201ENST00000516760 105 ntBASIC7.23□□□□□ -1.25
EPHA4P54764 Y_RNA.701-201ENST00000516812 110 ntBASIC7.23□□□□□ -1.25
EPHA4P54764 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC7.23□□□□□ -1.25
EPHA4P54764 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 1894.4 ms