Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 AC069213.2-201ENST00000420238 366 ntBASIC6.87□□□□□ -1.31
COL18A1P39060 C4BPAP2-201ENST00000428434 478 ntBASIC6.87□□□□□ -1.31
COL18A1P39060 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.87□□□□□ -1.31
COL18A1P39060 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.87□□□□□ -1.31
COL18A1P39060 CYCSP42-201ENST00000450823 238 ntBASIC6.87□□□□□ -1.31
COL18A1P39060 NDUFA5P9-201ENST00000472609 340 ntBASIC6.87□□□□□ -1.31
COL18A1P39060 AC097173.1-201ENST00000505862 819 ntBASIC6.87□□□□□ -1.31
COL18A1P39060 OR4A17P-201ENST00000526032 904 ntBASIC6.87□□□□□ -1.31
COL18A1P39060 AC130364.2-201ENST00000528639 604 ntBASIC6.87□□□□□ -1.31
COL18A1P39060 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
COL18A1P39060 BGLT3-201ENST00000564523 994 ntBASIC6.87□□□□□ -1.31
COL18A1P39060 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.87□□□□□ -1.31
COL18A1P39060 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.87□□□□□ -1.31
COL18A1P39060 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
COL18A1P39060 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
COL18A1P39060 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC6.87□□□□□ -1.31
COL18A1P39060 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC6.87□□□□□ -1.31
COL18A1P39060 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.87□□□□□ -1.31
COL18A1P39060 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL18A1P39060 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
COL18A1P39060 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.87□□□□□ -1.31
COL18A1P39060 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC6.87□□□□□ -1.31
COL18A1P39060 AC073465.2-201ENST00000440938 498 ntBASIC6.87□□□□□ -1.31
COL18A1P39060 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC6.87□□□□□ -1.31
COL18A1P39060 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC6.87□□□□□ -1.31
COL18A1P39060 AC012400.1-201ENST00000518452 381 ntBASIC6.87□□□□□ -1.31
COL18A1P39060 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL18A1P39060 IGKV1-32-201ENST00000519290 311 ntBASIC6.87□□□□□ -1.31
COL18A1P39060 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC6.87□□□□□ -1.31
COL18A1P39060 RGS5-219ENST00000528019 512 ntTSL 4 BASIC6.87□□□□□ -1.31
COL18A1P39060 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC6.87□□□□□ -1.31
COL18A1P39060 AP006289.1-201ENST00000538089 277 ntBASIC6.87□□□□□ -1.31
COL18A1P39060 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.87□□□□□ -1.31
COL18A1P39060 AC105129.1-201ENST00000560250 297 ntBASIC6.87□□□□□ -1.31
COL18A1P39060 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.87□□□□□ -1.31
COL18A1P39060 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC6.87□□□□□ -1.31
COL18A1P39060 AC068831.8-201ENST00000620171 435 ntBASIC6.87□□□□□ -1.31
COL18A1P39060 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
COL18A1P39060 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC6.87□□□□□ -1.31
COL18A1P39060 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.87□□□□□ -1.31
COL18A1P39060 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
COL18A1P39060 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.87□□□□□ -1.31
COL18A1P39060 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL18A1P39060 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
COL18A1P39060 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL18A1P39060 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.86□□□□□ -1.31
COL18A1P39060 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC6.86□□□□□ -1.31
COL18A1P39060 MAK-202ENST00000354489 3941 ntTSL 5 BASIC6.86□□□□□ -1.31
COL18A1P39060 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
COL18A1P39060 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
COL18A1P39060 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
COL18A1P39060 GNG5P2-201ENST00000372054 207 ntBASIC6.86□□□□□ -1.31
COL18A1P39060 RNA5SP332-201ENST00000391063 115 ntBASIC6.86□□□□□ -1.31
COL18A1P39060 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
COL18A1P39060 GLULP6-201ENST00000399502 913 ntBASIC6.86□□□□□ -1.31
COL18A1P39060 RPS29P10-201ENST00000439197 166 ntBASIC6.86□□□□□ -1.31
COL18A1P39060 RPL7P41-201ENST00000485823 957 ntBASIC6.86□□□□□ -1.31
COL18A1P39060 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC6.86□□□□□ -1.31
COL18A1P39060 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.86□□□□□ -1.31
COL18A1P39060 MORF4L1P3-201ENST00000525966 950 ntBASIC6.86□□□□□ -1.31
COL18A1P39060 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
COL18A1P39060 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC6.86□□□□□ -1.31
COL18A1P39060 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
COL18A1P39060 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.86□□□□□ -1.31
COL18A1P39060 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL18A1P39060 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
COL18A1P39060 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.86□□□□□ -1.31
COL18A1P39060 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
COL18A1P39060 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL18A1P39060 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
COL18A1P39060 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL18A1P39060 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL18A1P39060 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL18A1P39060 GTF2IP5-201ENST00000414608 731 ntBASIC6.85□□□□□ -1.31
COL18A1P39060 AC119751.6-201ENST00000416712 186 ntBASIC6.85□□□□□ -1.31
COL18A1P39060 P2RY10P2-201ENST00000416730 913 ntBASIC6.85□□□□□ -1.31
COL18A1P39060 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.85□□□□□ -1.31
COL18A1P39060 AL359265.2-201ENST00000434367 631 ntBASIC6.85□□□□□ -1.31
COL18A1P39060 SEPT10P1-201ENST00000517342 1162 ntBASIC6.85□□□□□ -1.31
COL18A1P39060 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC6.85□□□□□ -1.31
COL18A1P39060 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.85□□□□□ -1.31
COL18A1P39060 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.85□□□□□ -1.31
COL18A1P39060 AC009704.2-201ENST00000618739 483 ntBASIC6.85□□□□□ -1.31
COL18A1P39060 AC099654.6-201ENST00000636487 512 ntBASIC6.85□□□□□ -1.31
COL18A1P39060 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL18A1P39060 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
COL18A1P39060 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC6.85□□□□□ -1.31
COL18A1P39060 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
COL18A1P39060 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
COL18A1P39060 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC6.85□□□□□ -1.31
COL18A1P39060 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COL18A1P39060 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL18A1P39060 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COL18A1P39060 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COL18A1P39060 LRRC37A9P-201ENST00000603850 5376 ntBASIC6.85□□□□□ -1.31
COL18A1P39060 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COL18A1P39060 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COL18A1P39060 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL18A1P39060 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
COL18A1P39060 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms