Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 SUMO2P14-201ENST00000604488 293 ntBASIC5.6□□□□□ -1.51
CHMP24386 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.6□□□□□ -1.51
CHMP24386 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.6□□□□□ -1.51
CHMP24386 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CHMP24386 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHMP24386 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CHMP24386 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
CHMP24386 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.6□□□□□ -1.51
CHMP24386 AC006484.1-201ENST00000435086 1884 ntBASIC5.6□□□□□ -1.51
CHMP24386 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.6□□□□□ -1.51
CHMP24386 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHMP24386 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
CHMP24386 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.6□□□□□ -1.51
CHMP24386 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHMP24386 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHMP24386 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHMP24386 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CHMP24386 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CHMP24386 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHMP24386 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.59□□□□□ -1.51
CHMP24386 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHMP24386 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHMP24386 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CHMP24386 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHMP24386 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHMP24386 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHMP24386 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CHMP24386 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHMP24386 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHMP24386 FBXL21-201ENST00000297158 1305 ntBASIC5.59□□□□□ -1.51
CHMP24386 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.59□□□□□ -1.51
CHMP24386 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CHMP24386 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHMP24386 COX6B1P3-201ENST00000312310 260 ntBASIC5.59□□□□□ -1.51
CHMP24386 SNORA21-201ENST00000362423 132 ntBASIC5.59□□□□□ -1.51
CHMP24386 RNU6-650P-201ENST00000365658 111 ntBASIC5.59□□□□□ -1.51
CHMP24386 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHMP24386 RNA5SP156-201ENST00000410250 110 ntBASIC5.59□□□□□ -1.51
CHMP24386 AC002524.1-201ENST00000411687 547 ntBASIC5.59□□□□□ -1.51
CHMP24386 PTCD2P2-201ENST00000415579 1095 ntBASIC5.59□□□□□ -1.51
CHMP24386 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.59□□□□□ -1.51
CHMP24386 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.59□□□□□ -1.51
CHMP24386 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.59□□□□□ -1.51
CHMP24386 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.59□□□□□ -1.51
CHMP24386 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.59□□□□□ -1.51
CHMP24386 PNKDP1-201ENST00000435914 430 ntBASIC5.59□□□□□ -1.51
CHMP24386 RPS10P18-201ENST00000442662 495 ntBASIC5.59□□□□□ -1.51
CHMP24386 GAPDHP23-201ENST00000444823 993 ntBASIC5.59□□□□□ -1.51
CHMP24386 CFL1P4-201ENST00000451536 498 ntBASIC5.59□□□□□ -1.51
CHMP24386 RPL23AP23-201ENST00000452590 471 ntBASIC5.59□□□□□ -1.51
CHMP24386 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CHMP24386 PPIAP7-201ENST00000454070 489 ntBASIC5.59□□□□□ -1.51
CHMP24386 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.59□□□□□ -1.51
CHMP24386 RWDD4P1-201ENST00000488019 565 ntBASIC5.59□□□□□ -1.51
CHMP24386 NPM1P28-201ENST00000492269 840 ntBASIC5.59□□□□□ -1.51
CHMP24386 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC5.59□□□□□ -1.51
CHMP24386 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC5.59□□□□□ -1.51
CHMP24386 ST13P12-201ENST00000508958 1094 ntBASIC5.59□□□□□ -1.51
CHMP24386 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.59□□□□□ -1.51
CHMP24386 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.59□□□□□ -1.51
CHMP24386 RNU6-1102P-201ENST00000516149 96 ntBASIC5.59□□□□□ -1.51
CHMP24386 Y_RNA.710-201ENST00000516975 110 ntBASIC5.59□□□□□ -1.51
CHMP24386 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CHMP24386 AP000620.1-201ENST00000527147 504 ntBASIC5.59□□□□□ -1.51
CHMP24386 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.59□□□□□ -1.51
CHMP24386 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.59□□□□□ -1.51
CHMP24386 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.59□□□□□ -1.51
CHMP24386 AL049870.4-201ENST00000555741 486 ntBASIC5.59□□□□□ -1.51
CHMP24386 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CHMP24386 AC025175.1-201ENST00000606482 759 ntBASIC5.59□□□□□ -1.51
CHMP24386 AL158211.2-201ENST00000607282 395 ntBASIC5.59□□□□□ -1.51
CHMP24386 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.59□□□□□ -1.51
CHMP24386 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.59□□□□□ -1.51
CHMP24386 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.59□□□□□ -1.51
CHMP24386 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.59□□□□□ -1.51
CHMP24386 AP005435.3-201ENST00000531260 3198 ntBASIC5.59□□□□□ -1.51
CHMP24386 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHMP24386 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHMP24386 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CHMP24386 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHMP24386 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CHMP24386 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CHMP24386 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.59□□□□□ -1.52
CHMP24386 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.59□□□□□ -1.52
CHMP24386 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
CHMP24386 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
CHMP24386 AL161756.3-201ENST00000641216 2071 ntBASIC5.59□□□□□ -1.52
CHMP24386 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CHMP24386 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.58□□□□□ -1.52
CHMP24386 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.58□□□□□ -1.52
CHMP24386 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.58□□□□□ -1.52
CHMP24386 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHMP24386 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.58□□□□□ -1.52
CHMP24386 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.58□□□□□ -1.52
CHMP24386 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHMP24386 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.58□□□□□ -1.52
CHMP24386 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CHMP24386 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC5.58□□□□□ -1.52
CHMP24386 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHMP24386 U3.10-201ENST00000364459 214 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms