Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
LMNB1P20700 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
LMNB1P20700 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
LMNB1P20700 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
LMNB1P20700 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
LMNB1P20700 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LMNB1P20700 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LMNB1P20700 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
LMNB1P20700 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LMNB1P20700 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LMNB1P20700 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
LMNB1P20700 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
LMNB1P20700 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
LMNB1P20700 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
LMNB1P20700 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
LMNB1P20700 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC7.67□□□□□ -1.18
LMNB1P20700 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC7.67□□□□□ -1.18
LMNB1P20700 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC7.67□□□□□ -1.18
LMNB1P20700 Y_RNA.505-201ENST00000384489 102 ntBASIC7.67□□□□□ -1.18
LMNB1P20700 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
LMNB1P20700 AP002784.2-201ENST00000397300 549 ntBASIC7.67□□□□□ -1.18
LMNB1P20700 HMGB1P49-201ENST00000418882 569 ntBASIC7.67□□□□□ -1.18
LMNB1P20700 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
LMNB1P20700 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC7.67□□□□□ -1.18
LMNB1P20700 GTF2IP3-201ENST00000433887 494 ntBASIC7.67□□□□□ -1.18
LMNB1P20700 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC7.67□□□□□ -1.18
LMNB1P20700 AL359265.1-201ENST00000440296 795 ntBASIC7.67□□□□□ -1.18
LMNB1P20700 AC073052.1-201ENST00000440417 714 ntBASIC7.67□□□□□ -1.18
LMNB1P20700 GAS5-218ENST00000448718 565 ntTSL 2 BASIC7.67□□□□□ -1.18
LMNB1P20700 AC115223.1-201ENST00000466377 870 ntBASIC7.67□□□□□ -1.18
LMNB1P20700 PFN1P6-201ENST00000476786 399 ntBASIC7.67□□□□□ -1.18
LMNB1P20700 AC091951.3-201ENST00000504093 246 ntBASIC7.67□□□□□ -1.18
LMNB1P20700 SETP21-201ENST00000514799 892 ntBASIC7.67□□□□□ -1.18
LMNB1P20700 CYCSP22-201ENST00000517555 339 ntBASIC7.67□□□□□ -1.18
LMNB1P20700 AC023050.2-201ENST00000544968 387 ntBASIC7.67□□□□□ -1.18
LMNB1P20700 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC7.67□□□□□ -1.18
LMNB1P20700 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC7.67□□□□□ -1.18
LMNB1P20700 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC7.67□□□□□ -1.18
LMNB1P20700 AC104695.2-201ENST00000605056 775 ntBASIC7.67□□□□□ -1.18
LMNB1P20700 AL360219.1-201ENST00000610230 366 ntBASIC7.67□□□□□ -1.18
LMNB1P20700 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
LMNB1P20700 AC005839.1-201ENST00000624148 3213 ntBASIC7.67□□□□□ -1.18
LMNB1P20700 ZNF658B-201ENST00000602828 3408 ntBASIC7.67□□□□□ -1.18
LMNB1P20700 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LMNB1P20700 MTND4P4-201ENST00000439033 1366 ntBASIC7.67□□□□□ -1.18
LMNB1P20700 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LMNB1P20700 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LMNB1P20700 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.67□□□□□ -1.18
LMNB1P20700 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.67□□□□□ -1.18
LMNB1P20700 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
LMNB1P20700 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC7.67□□□□□ -1.18
LMNB1P20700 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
LMNB1P20700 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LMNB1P20700 BTK-209ENST00000618050 2417 ntTSL 5 BASIC7.67□□□□□ -1.18
LMNB1P20700 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.67□□□□□ -1.18
LMNB1P20700 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LMNB1P20700 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
LMNB1P20700 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LMNB1P20700 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.66□□□□□ -1.18
LMNB1P20700 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LMNB1P20700 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LMNB1P20700 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.66□□□□□ -1.18
LMNB1P20700 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LMNB1P20700 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LMNB1P20700 AL359715.3-201ENST00000569267 2123 ntBASIC7.66□□□□□ -1.18
LMNB1P20700 AP004289.1-201ENST00000436307 2205 ntBASIC7.66□□□□□ -1.18
LMNB1P20700 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.66□□□□□ -1.18
LMNB1P20700 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LMNB1P20700 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LMNB1P20700 RNU6-636P-201ENST00000384598 107 ntBASIC7.66□□□□□ -1.18
LMNB1P20700 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
LMNB1P20700 AC136624.1-201ENST00000400791 413 ntBASIC7.66□□□□□ -1.18
LMNB1P20700 AL096711.1-201ENST00000404780 554 ntBASIC7.66□□□□□ -1.18
LMNB1P20700 ATF1P1-201ENST00000406040 927 ntBASIC7.66□□□□□ -1.18
LMNB1P20700 RNU4ATAC2P-201ENST00000408674 126 ntBASIC7.66□□□□□ -1.18
LMNB1P20700 RNU4-34P-201ENST00000410431 124 ntBASIC7.66□□□□□ -1.18
LMNB1P20700 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC7.66□□□□□ -1.18
LMNB1P20700 DPPA2P3-201ENST00000411853 655 ntBASIC7.66□□□□□ -1.18
LMNB1P20700 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LMNB1P20700 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC7.66□□□□□ -1.18
LMNB1P20700 AC093155.2-201ENST00000420734 937 ntBASIC7.66□□□□□ -1.18
LMNB1P20700 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC7.66□□□□□ -1.18
LMNB1P20700 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC7.66□□□□□ -1.18
LMNB1P20700 RPS27P18-201ENST00000431701 247 ntBASIC7.66□□□□□ -1.18
LMNB1P20700 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC7.66□□□□□ -1.18
LMNB1P20700 AC084290.1-201ENST00000434995 374 ntBASIC7.66□□□□□ -1.18
LMNB1P20700 RPL6P5-201ENST00000445678 828 ntBASIC7.66□□□□□ -1.18
LMNB1P20700 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC7.66□□□□□ -1.18
LMNB1P20700 RAB28P3-201ENST00000448325 597 ntBASIC7.66□□□□□ -1.18
LMNB1P20700 AL133217.1-201ENST00000450980 425 ntBASIC7.66□□□□□ -1.18
LMNB1P20700 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC7.66□□□□□ -1.18
LMNB1P20700 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC7.66□□□□□ -1.18
LMNB1P20700 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC7.66□□□□□ -1.18
LMNB1P20700 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC7.66□□□□□ -1.18
LMNB1P20700 AC095057.1-201ENST00000507583 168 ntBASIC7.66□□□□□ -1.18
LMNB1P20700 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC7.66□□□□□ -1.18
LMNB1P20700 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC7.66□□□□□ -1.18
LMNB1P20700 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC7.66□□□□□ -1.18
LMNB1P20700 AC010306.1-201ENST00000523223 1117 ntBASIC7.66□□□□□ -1.18
LMNB1P20700 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms