Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.02□□□□□ -1.45
COL11A1P12107 AC011447.4-201ENST00000587562 111 ntBASIC6.02□□□□□ -1.45
COL11A1P12107 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.02□□□□□ -1.45
COL11A1P12107 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC6.02□□□□□ -1.45
COL11A1P12107 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL11A1P12107 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL11A1P12107 AC007996.1-201ENST00000620414 2821 ntBASIC6.02□□□□□ -1.45
COL11A1P12107 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL11A1P12107 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL11A1P12107 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL11A1P12107 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL11A1P12107 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL11A1P12107 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL11A1P12107 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL11A1P12107 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.02□□□□□ -1.45
COL11A1P12107 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.02□□□□□ -1.45
COL11A1P12107 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.02□□□□□ -1.45
COL11A1P12107 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.02□□□□□ -1.45
COL11A1P12107 TEX41-205ENST00000431734 529 ntTSL 4 BASIC6.02□□□□□ -1.45
COL11A1P12107 ELOCP3-201ENST00000439303 348 ntBASIC6.02□□□□□ -1.45
COL11A1P12107 KNOP1P3-201ENST00000446933 426 ntBASIC6.02□□□□□ -1.45
COL11A1P12107 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.02□□□□□ -1.45
COL11A1P12107 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.02□□□□□ -1.45
COL11A1P12107 AC002075.1-201ENST00000457396 676 ntBASIC6.02□□□□□ -1.45
COL11A1P12107 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC6.02□□□□□ -1.45
COL11A1P12107 PCNPP1-201ENST00000552501 511 ntBASIC6.02□□□□□ -1.45
COL11A1P12107 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.02□□□□□ -1.45
COL11A1P12107 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.02□□□□□ -1.45
COL11A1P12107 EIF3FP1-201ENST00000613970 806 ntBASIC6.02□□□□□ -1.45
COL11A1P12107 uc_338.18-201ENST00000615451 175 ntBASIC6.02□□□□□ -1.45
COL11A1P12107 AL353662.3-201ENST00000625131 237 ntBASIC6.02□□□□□ -1.45
COL11A1P12107 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.01□□□□□ -1.45
COL11A1P12107 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL11A1P12107 AP004289.1-201ENST00000436307 2205 ntBASIC6.01□□□□□ -1.45
COL11A1P12107 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
COL11A1P12107 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL11A1P12107 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL11A1P12107 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL11A1P12107 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL11A1P12107 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL11A1P12107 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
COL11A1P12107 LCOR-201ENST00000286067 4542 ntBASIC6.01□□□□□ -1.45
COL11A1P12107 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.01□□□□□ -1.45
COL11A1P12107 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL11A1P12107 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL11A1P12107 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL11A1P12107 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL11A1P12107 HSPA8P14-201ENST00000552265 1805 ntBASIC6.01□□□□□ -1.45
COL11A1P12107 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.01□□□□□ -1.45
COL11A1P12107 CR1-204ENST00000367052 7469 ntTSL 5 BASIC6.01□□□□□ -1.45
COL11A1P12107 CR1-205ENST00000367053 7469 ntTSL 5 BASIC6.01□□□□□ -1.45
COL11A1P12107 RN7SKP149-201ENST00000363008 344 ntBASIC6.01□□□□□ -1.45
COL11A1P12107 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL11A1P12107 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL11A1P12107 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL11A1P12107 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL11A1P12107 HMGB1P32-201ENST00000425971 565 ntBASIC6.01□□□□□ -1.45
COL11A1P12107 AL161722.2-201ENST00000434731 981 ntBASIC6.01□□□□□ -1.45
COL11A1P12107 AC073465.2-201ENST00000440938 498 ntBASIC6.01□□□□□ -1.45
COL11A1P12107 AC009127.1-201ENST00000467090 155 ntBASIC6.01□□□□□ -1.45
COL11A1P12107 RN7SKP248-201ENST00000516278 305 ntBASIC6.01□□□□□ -1.45
COL11A1P12107 BRD9P1-201ENST00000529855 560 ntBASIC6.01□□□□□ -1.45
COL11A1P12107 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.01□□□□□ -1.45
COL11A1P12107 OR4A6P-201ENST00000534364 970 ntBASIC6.01□□□□□ -1.45
COL11A1P12107 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.01□□□□□ -1.45
COL11A1P12107 PDCD6IPP2-207ENST00000566321 1069 ntBASIC6.01□□□□□ -1.45
COL11A1P12107 AC011840.5-201ENST00000582125 771 ntBASIC6.01□□□□□ -1.45
COL11A1P12107 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.01□□□□□ -1.45
COL11A1P12107 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL11A1P12107 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC6.01□□□□□ -1.45
COL11A1P12107 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC6.01□□□□□ -1.45
COL11A1P12107 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC6.01□□□□□ -1.45
COL11A1P12107 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.01□□□□□ -1.45
COL11A1P12107 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
COL11A1P12107 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL11A1P12107 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL11A1P12107 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL11A1P12107 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL11A1P12107 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL11A1P12107 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6□□□□□ -1.45
COL11A1P12107 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COL11A1P12107 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6□□□□□ -1.45
COL11A1P12107 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6□□□□□ -1.45
COL11A1P12107 AC018765.1-201ENST00000623357 3446 ntBASIC6□□□□□ -1.45
COL11A1P12107 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COL11A1P12107 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
COL11A1P12107 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6□□□□□ -1.45
COL11A1P12107 RNA5SP123-201ENST00000363244 119 ntBASIC6□□□□□ -1.45
COL11A1P12107 COX6B1P1-201ENST00000415962 213 ntBASIC6□□□□□ -1.45
COL11A1P12107 RPS4XP16-201ENST00000427198 791 ntBASIC6□□□□□ -1.45
COL11A1P12107 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6□□□□□ -1.45
COL11A1P12107 AC011753.3-201ENST00000443436 406 ntBASIC6□□□□□ -1.45
COL11A1P12107 AC112498.1-201ENST00000444401 332 ntBASIC6□□□□□ -1.45
COL11A1P12107 RPS3AP53-201ENST00000454716 778 ntBASIC6□□□□□ -1.45
COL11A1P12107 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6□□□□□ -1.45
COL11A1P12107 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6□□□□□ -1.45
COL11A1P12107 IGHVII-44-2-201ENST00000517728 250 ntBASIC6□□□□□ -1.45
COL11A1P12107 NOP10-202ENST00000557912 436 ntTSL 2 BASIC6□□□□□ -1.45
COL11A1P12107 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6□□□□□ -1.45
COL11A1P12107 MIR4330-201ENST00000579077 105 ntBASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms