Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CD48P09326 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CD48P09326 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CD48P09326 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CD48P09326 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CD48P09326 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CD48P09326 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.65□□□□□ -1.5
CD48P09326 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CD48P09326 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CD48P09326 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
CD48P09326 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CD48P09326 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CD48P09326 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CD48P09326 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CD48P09326 MIR1282-201ENST00000408865 101 ntBASIC5.65□□□□□ -1.5
CD48P09326 GPS2P1-201ENST00000411761 986 ntBASIC5.65□□□□□ -1.5
CD48P09326 OR2AT2P-201ENST00000413438 905 ntBASIC5.65□□□□□ -1.5
CD48P09326 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.65□□□□□ -1.5
CD48P09326 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.65□□□□□ -1.5
CD48P09326 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.65□□□□□ -1.5
CD48P09326 RPS29P14-201ENST00000431518 171 ntBASIC5.65□□□□□ -1.5
CD48P09326 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CD48P09326 AL390119.1-201ENST00000440329 312 ntBASIC5.65□□□□□ -1.5
CD48P09326 HMGN1P36-201ENST00000446623 298 ntBASIC5.65□□□□□ -1.5
CD48P09326 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.65□□□□□ -1.5
CD48P09326 PSAT1P4-201ENST00000466500 526 ntBASIC5.65□□□□□ -1.5
CD48P09326 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.65□□□□□ -1.5
CD48P09326 AC074087.1-201ENST00000512059 724 ntBASIC5.65□□□□□ -1.5
CD48P09326 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.65□□□□□ -1.5
CD48P09326 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.65□□□□□ -1.5
CD48P09326 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.65□□□□□ -1.5
CD48P09326 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.65□□□□□ -1.5
CD48P09326 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.65□□□□□ -1.5
CD48P09326 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.65□□□□□ -1.5
CD48P09326 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.65□□□□□ -1.5
CD48P09326 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.65□□□□□ -1.5
CD48P09326 AC010503.3-201ENST00000594355 540 ntBASIC5.65□□□□□ -1.5
CD48P09326 AL021368.1-201ENST00000607490 540 ntBASIC5.65□□□□□ -1.5
CD48P09326 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.65□□□□□ -1.5
CD48P09326 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.65□□□□□ -1.51
CD48P09326 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.65□□□□□ -1.51
CD48P09326 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CD48P09326 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.65□□□□□ -1.51
CD48P09326 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.65□□□□□ -1.51
CD48P09326 AC004656.1-201ENST00000568479 4951 ntBASIC5.65□□□□□ -1.51
CD48P09326 AL360270.2-201ENST00000562952 5985 ntBASIC5.65□□□□□ -1.51
CD48P09326 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CD48P09326 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
CD48P09326 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.65□□□□□ -1.51
CD48P09326 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CD48P09326 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CD48P09326 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
CD48P09326 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CD48P09326 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.64□□□□□ -1.51
CD48P09326 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CD48P09326 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CD48P09326 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CD48P09326 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.64□□□□□ -1.51
CD48P09326 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CD48P09326 AC003985.2-201ENST00000562268 1669 ntBASIC5.64□□□□□ -1.51
CD48P09326 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CD48P09326 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CD48P09326 RNA5SP122-201ENST00000384457 108 ntBASIC5.64□□□□□ -1.51
CD48P09326 VN1R3-201ENST00000418822 919 ntBASIC5.64□□□□□ -1.51
CD48P09326 AC244453.4-201ENST00000419150 388 ntBASIC5.64□□□□□ -1.51
CD48P09326 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.64□□□□□ -1.51
CD48P09326 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.64□□□□□ -1.51
CD48P09326 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CD48P09326 RPL12P24-201ENST00000474907 486 ntBASIC5.64□□□□□ -1.51
CD48P09326 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CD48P09326 AC109464.1-201ENST00000511091 819 ntBASIC5.64□□□□□ -1.51
CD48P09326 HMGN1P9-201ENST00000515212 298 ntBASIC5.64□□□□□ -1.51
CD48P09326 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.64□□□□□ -1.51
CD48P09326 NRBF2P4-201ENST00000520874 850 ntBASIC5.64□□□□□ -1.51
CD48P09326 AC112191.2-201ENST00000522428 333 ntBASIC5.64□□□□□ -1.51
CD48P09326 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.64□□□□□ -1.51
CD48P09326 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.64□□□□□ -1.51
CD48P09326 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CD48P09326 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.64□□□□□ -1.51
CD48P09326 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CD48P09326 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.64□□□□□ -1.51
CD48P09326 MIR4505-201ENST00000582238 73 ntBASIC5.64□□□□□ -1.51
CD48P09326 LSM1P2-201ENST00000604911 322 ntBASIC5.64□□□□□ -1.51
CD48P09326 AC015982.1-201ENST00000608113 465 ntBASIC5.64□□□□□ -1.51
CD48P09326 RN7SL787P-201ENST00000613000 284 ntBASIC5.64□□□□□ -1.51
CD48P09326 AC132068.1-201ENST00000623805 459 ntBASIC5.64□□□□□ -1.51
CD48P09326 AC138965.3-201ENST00000623875 498 ntBASIC5.64□□□□□ -1.51
CD48P09326 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.64□□□□□ -1.51
CD48P09326 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CD48P09326 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CD48P09326 AC138627.1-204ENST00000641894 765 ntBASIC5.64□□□□□ -1.51
CD48P09326 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CD48P09326 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.64□□□□□ -1.51
CD48P09326 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.64□□□□□ -1.51
CD48P09326 LINC01963-201ENST00000562038 3148 ntBASIC5.64□□□□□ -1.51
CD48P09326 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CD48P09326 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CD48P09326 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CD48P09326 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
CD48P09326 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms