Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
RETP07949 ZNF733P-202ENST00000444809 1573 ntBASIC5.75□□□□□ -1.49
RETP07949 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.75□□□□□ -1.49
RETP07949 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RETP07949 AL359955.1-201ENST00000455242 3275 ntBASIC5.75□□□□□ -1.49
RETP07949 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RETP07949 MAPK10-338ENST00000641647 3362 ntBASIC5.75□□□□□ -1.49
RETP07949 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.74□□□□□ -1.49
RETP07949 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RETP07949 AC005224.3-201ENST00000584683 2140 ntBASIC5.74□□□□□ -1.49
RETP07949 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.74□□□□□ -1.49
RETP07949 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.74□□□□□ -1.49
RETP07949 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RETP07949 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RETP07949 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RETP07949 AC005294.1-201ENST00000355509 281 ntBASIC5.74□□□□□ -1.49
RETP07949 RNA5SP131-201ENST00000365452 119 ntBASIC5.74□□□□□ -1.49
RETP07949 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.74□□□□□ -1.49
RETP07949 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.74□□□□□ -1.49
RETP07949 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.74□□□□□ -1.49
RETP07949 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.74□□□□□ -1.49
RETP07949 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.74□□□□□ -1.49
RETP07949 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.74□□□□□ -1.49
RETP07949 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RETP07949 RPL23AP40-201ENST00000487630 390 ntBASIC5.74□□□□□ -1.49
RETP07949 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.74□□□□□ -1.49
RETP07949 AC009120.1-201ENST00000493458 473 ntBASIC5.74□□□□□ -1.49
RETP07949 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RETP07949 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.74□□□□□ -1.49
RETP07949 AC021678.3-201ENST00000517893 476 ntBASIC5.74□□□□□ -1.49
RETP07949 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.74□□□□□ -1.49
RETP07949 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.74□□□□□ -1.49
RETP07949 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.74□□□□□ -1.49
RETP07949 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.74□□□□□ -1.49
RETP07949 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RETP07949 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
RETP07949 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
RETP07949 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RETP07949 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.74□□□□□ -1.49
RETP07949 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.74□□□□□ -1.49
RETP07949 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
RETP07949 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
RETP07949 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RETP07949 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.74□□□□□ -1.49
RETP07949 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
RETP07949 LINC01963-201ENST00000562038 3148 ntBASIC5.74□□□□□ -1.49
RETP07949 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
RETP07949 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RETP07949 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RETP07949 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.74□□□□□ -1.49
RETP07949 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.73□□□□□ -1.49
RETP07949 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
RETP07949 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RETP07949 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
RETP07949 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.73□□□□□ -1.49
RETP07949 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RETP07949 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
RETP07949 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.73□□□□□ -1.49
RETP07949 RNA5SP305-201ENST00000362665 119 ntBASIC5.73□□□□□ -1.49
RETP07949 RNU4-2-201ENST00000365668 141 ntBASIC5.73□□□□□ -1.49
RETP07949 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RETP07949 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
RETP07949 AL354868.1-201ENST00000417077 482 ntBASIC5.73□□□□□ -1.49
RETP07949 AL807761.1-201ENST00000417622 171 ntBASIC5.73□□□□□ -1.49
RETP07949 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.73□□□□□ -1.49
RETP07949 AL133325.1-201ENST00000421090 382 ntBASIC5.73□□□□□ -1.49
RETP07949 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.73□□□□□ -1.49
RETP07949 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.73□□□□□ -1.49
RETP07949 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.73□□□□□ -1.49
RETP07949 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RETP07949 AC090602.1-201ENST00000469695 252 ntBASIC5.73□□□□□ -1.49
RETP07949 AC093890.1-201ENST00000502554 540 ntBASIC5.73□□□□□ -1.49
RETP07949 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RETP07949 NPM1P5-201ENST00000557228 838 ntBASIC5.73□□□□□ -1.49
RETP07949 MIR3691-201ENST00000578066 90 ntBASIC5.73□□□□□ -1.49
RETP07949 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.73□□□□□ -1.49
RETP07949 AC006115.2-201ENST00000596823 202 ntBASIC5.73□□□□□ -1.49
RETP07949 AL355974.3-201ENST00000617383 467 ntBASIC5.73□□□□□ -1.49
RETP07949 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RETP07949 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RETP07949 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.73□□□□□ -1.49
RETP07949 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RETP07949 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.73□□□□□ -1.49
RETP07949 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.73□□□□□ -1.49
RETP07949 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.73□□□□□ -1.49
RETP07949 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.72□□□□□ -1.49
RETP07949 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RETP07949 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
RETP07949 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
RETP07949 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
RETP07949 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RETP07949 RPL23P2-201ENST00000320371 421 ntBASIC5.72□□□□□ -1.49
RETP07949 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.72□□□□□ -1.49
RETP07949 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.72□□□□□ -1.49
RETP07949 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
RETP07949 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
RETP07949 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.72□□□□□ -1.49
RETP07949 GNG5P5-201ENST00000420444 220 ntBASIC5.72□□□□□ -1.49
RETP07949 SRSF1P1-201ENST00000424058 520 ntBASIC5.72□□□□□ -1.49
RETP07949 HSPE1P27-201ENST00000430808 296 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms