Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 U3.7-201ENST00000363668 216 ntBASIC5.18□□□□□ -1.58
MT-ND1P03886 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.18□□□□□ -1.58
MT-ND1P03886 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.18□□□□□ -1.58
MT-ND1P03886 AC126120.1-201ENST00000431082 470 ntBASIC5.18□□□□□ -1.58
MT-ND1P03886 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.18□□□□□ -1.58
MT-ND1P03886 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
MT-ND1P03886 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.18□□□□□ -1.58
MT-ND1P03886 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.18□□□□□ -1.58
MT-ND1P03886 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
MT-ND1P03886 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.18□□□□□ -1.58
MT-ND1P03886 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.18□□□□□ -1.58
MT-ND1P03886 AC245028.2-201ENST00000458673 253 ntBASIC5.18□□□□□ -1.58
MT-ND1P03886 RN7SL188P-201ENST00000469842 285 ntBASIC5.18□□□□□ -1.58
MT-ND1P03886 RN7SL570P-201ENST00000484405 292 ntBASIC5.18□□□□□ -1.58
MT-ND1P03886 AC122718.2-201ENST00000505325 591 ntBASIC5.18□□□□□ -1.58
MT-ND1P03886 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.18□□□□□ -1.58
MT-ND1P03886 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.18□□□□□ -1.58
MT-ND1P03886 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.18□□□□□ -1.58
MT-ND1P03886 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.18□□□□□ -1.58
MT-ND1P03886 HNRNPRP2-201ENST00000528421 743 ntBASIC5.18□□□□□ -1.58
MT-ND1P03886 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.18□□□□□ -1.58
MT-ND1P03886 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.18□□□□□ -1.58
MT-ND1P03886 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.18□□□□□ -1.58
MT-ND1P03886 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.18□□□□□ -1.58
MT-ND1P03886 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
MT-ND1P03886 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.18□□□□□ -1.58
MT-ND1P03886 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.18□□□□□ -1.58
MT-ND1P03886 CYCSP38-201ENST00000559840 322 ntBASIC5.18□□□□□ -1.58
MT-ND1P03886 AC026826.3-201ENST00000561747 158 ntBASIC5.18□□□□□ -1.58
MT-ND1P03886 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.18□□□□□ -1.58
MT-ND1P03886 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.18□□□□□ -1.58
MT-ND1P03886 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.18□□□□□ -1.58
MT-ND1P03886 AL359091.2-201ENST00000609303 556 ntBASIC5.18□□□□□ -1.58
MT-ND1P03886 AC090607.5-201ENST00000615692 224 ntBASIC5.18□□□□□ -1.58
MT-ND1P03886 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.18□□□□□ -1.58
MT-ND1P03886 MIR6806-201ENST00000622141 64 ntBASIC5.18□□□□□ -1.58
MT-ND1P03886 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.18□□□□□ -1.58
MT-ND1P03886 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.18□□□□□ -1.58
MT-ND1P03886 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
MT-ND1P03886 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.18□□□□□ -1.58
MT-ND1P03886 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
MT-ND1P03886 AC003985.2-201ENST00000562268 1669 ntBASIC5.18□□□□□ -1.58
MT-ND1P03886 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
MT-ND1P03886 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
MT-ND1P03886 LYARP1-201ENST00000436977 1501 ntBASIC5.18□□□□□ -1.58
MT-ND1P03886 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
MT-ND1P03886 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
MT-ND1P03886 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
MT-ND1P03886 AC097063.1-201ENST00000426714 1797 ntBASIC5.17□□□□□ -1.58
MT-ND1P03886 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.17□□□□□ -1.58
MT-ND1P03886 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
MT-ND1P03886 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
MT-ND1P03886 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
MT-ND1P03886 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
MT-ND1P03886 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
MT-ND1P03886 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
MT-ND1P03886 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.17□□□□□ -1.58
MT-ND1P03886 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.17□□□□□ -1.58
MT-ND1P03886 RNA5SP500-201ENST00000364486 119 ntBASIC5.17□□□□□ -1.58
MT-ND1P03886 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.17□□□□□ -1.58
MT-ND1P03886 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.17□□□□□ -1.58
MT-ND1P03886 SNORA79B-201ENST00000410557 148 ntBASIC5.17□□□□□ -1.58
MT-ND1P03886 MTATP6P19-201ENST00000413797 659 ntBASIC5.17□□□□□ -1.58
MT-ND1P03886 RIMKLBP2-201ENST00000424737 654 ntBASIC5.17□□□□□ -1.58
MT-ND1P03886 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.17□□□□□ -1.58
MT-ND1P03886 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.17□□□□□ -1.58
MT-ND1P03886 AC092106.1-201ENST00000444291 373 ntBASIC5.17□□□□□ -1.58
MT-ND1P03886 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.17□□□□□ -1.58
MT-ND1P03886 OR52E3P-201ENST00000452083 936 ntBASIC5.17□□□□□ -1.58
MT-ND1P03886 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.17□□□□□ -1.58
MT-ND1P03886 AC118758.1-202ENST00000454719 225 ntBASIC5.17□□□□□ -1.58
MT-ND1P03886 PSAT1P4-201ENST00000466500 526 ntBASIC5.17□□□□□ -1.58
MT-ND1P03886 RN7SL583P-201ENST00000475692 287 ntBASIC5.17□□□□□ -1.58
MT-ND1P03886 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.17□□□□□ -1.58
MT-ND1P03886 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.17□□□□□ -1.58
MT-ND1P03886 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC5.17□□□□□ -1.58
MT-ND1P03886 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.17□□□□□ -1.58
MT-ND1P03886 HMGN1P9-201ENST00000515212 298 ntBASIC5.17□□□□□ -1.58
MT-ND1P03886 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC5.17□□□□□ -1.58
MT-ND1P03886 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.17□□□□□ -1.58
MT-ND1P03886 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.17□□□□□ -1.58
MT-ND1P03886 HMGN2P36-201ENST00000529541 409 ntBASIC5.17□□□□□ -1.58
MT-ND1P03886 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
MT-ND1P03886 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.17□□□□□ -1.58
MT-ND1P03886 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
MT-ND1P03886 AC011270.1-201ENST00000558606 583 ntBASIC5.17□□□□□ -1.58
MT-ND1P03886 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.17□□□□□ -1.58
MT-ND1P03886 OR51C1P-201ENST00000608504 942 ntBASIC5.17□□□□□ -1.58
MT-ND1P03886 NF1P10-201ENST00000613227 742 ntBASIC5.17□□□□□ -1.58
MT-ND1P03886 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.17□□□□□ -1.58
MT-ND1P03886 AL683826.1-201ENST00000624104 627 ntBASIC5.17□□□□□ -1.58
MT-ND1P03886 AC022919.1-201ENST00000624979 626 ntBASIC5.17□□□□□ -1.58
MT-ND1P03886 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.17□□□□□ -1.58
MT-ND1P03886 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.17□□□□□ -1.58
MT-ND1P03886 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.17□□□□□ -1.58
MT-ND1P03886 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
MT-ND1P03886 AL031595.2-201ENST00000624215 19071 ntBASIC5.17□□□□□ -1.58
MT-ND1P03886 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
MT-ND1P03886 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
MT-ND1P03886 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms