Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 FAXC-201ENST00000389677 11508 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
USH2AO75445 VN1R51P-201ENST00000411675 945 ntBASIC2.3□□□□□ -2.04
USH2AO75445 CRYBB2P1-203ENST00000415709 538 ntBASIC2.3□□□□□ -2.04
USH2AO75445 TMBIM7P-201ENST00000418074 855 ntBASIC2.3□□□□□ -2.04
USH2AO75445 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC2.3□□□□□ -2.04
USH2AO75445 RN7SL429P-201ENST00000479090 223 ntBASIC2.3□□□□□ -2.04
USH2AO75445 RN7SL489P-201ENST00000486185 223 ntBASIC2.3□□□□□ -2.04
USH2AO75445 RN7SL423P-201ENST00000486202 304 ntBASIC2.3□□□□□ -2.04
USH2AO75445 RN7SL327P-201ENST00000488659 223 ntBASIC2.3□□□□□ -2.04
USH2AO75445 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
USH2AO75445 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC2.3□□□□□ -2.04
USH2AO75445 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC2.3□□□□□ -2.04
USH2AO75445 GMFG-202ENST00000594700 397 ntTSL 2 BASIC2.3□□□□□ -2.04
USH2AO75445 RN7SL853P-201ENST00000617250 223 ntBASIC2.3□□□□□ -2.04
USH2AO75445 OR4D9-202ENST00000641278 6063 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
USH2AO75445 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
USH2AO75445 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
USH2AO75445 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
USH2AO75445 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC2.3□□□□□ -2.04
USH2AO75445 RBM33-207ENST00000401878 10149 ntAPPRIS P2 TSL 5 BASIC2.3□□□□□ -2.04
USH2AO75445 AC104162.1-201ENST00000430831 2382 ntBASIC2.3□□□□□ -2.04
USH2AO75445 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
USH2AO75445 SCN5A-205ENST00000423572 8362 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
USH2AO75445 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
USH2AO75445 NBPF9-202ENST00000584027 5034 ntAPPRIS P2 TSL 5 BASIC2.3□□□□□ -2.04
USH2AO75445 NAV2-201ENST00000349880 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
USH2AO75445 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC2.3□□□□□ -2.04
USH2AO75445 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
USH2AO75445 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
USH2AO75445 CABIN1-214ENST00000617531 7072 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
USH2AO75445 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
USH2AO75445 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC2.3□□□□□ -2.04
USH2AO75445 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC2.3□□□□□ -2.04
USH2AO75445 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
USH2AO75445 AC108751.3-201ENST00000461814 1020 ntBASIC2.3□□□□□ -2.04
USH2AO75445 AC008958.1-201ENST00000511047 682 ntBASIC2.3□□□□□ -2.04
USH2AO75445 RN7SKP276-201ENST00000516242 268 ntBASIC2.3□□□□□ -2.04
USH2AO75445 OR5AM1P-201ENST00000532136 1032 ntBASIC2.3□□□□□ -2.04
USH2AO75445 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC2.3□□□□□ -2.04
USH2AO75445 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC2.3□□□□□ -2.04
USH2AO75445 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
USH2AO75445 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC2.3□□□□□ -2.04
USH2AO75445 MKI67-202ENST00000368654 12678 ntAPPRIS P3 TSL 2 BASIC2.3□□□□□ -2.04
USH2AO75445 KIF26B-201ENST00000366518 12113 ntTSL 5 BASIC2.3□□□□□ -2.04
USH2AO75445 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
USH2AO75445 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
USH2AO75445 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
USH2AO75445 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC2.29□□□□□ -2.04
USH2AO75445 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC2.29□□□□□ -2.04
USH2AO75445 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC2.29□□□□□ -2.04
USH2AO75445 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
USH2AO75445 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC2.29□□□□□ -2.04
USH2AO75445 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
USH2AO75445 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
USH2AO75445 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
USH2AO75445 ZAN-205ENST00000613979 8669 ntAPPRIS P4 TSL 1 (best) BASIC2.29□□□□□ -2.04
USH2AO75445 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
USH2AO75445 SNORA48.4-201ENST00000391089 134 ntBASIC2.29□□□□□ -2.04
USH2AO75445 RNA5SP251-201ENST00000410614 137 ntBASIC2.29□□□□□ -2.04
USH2AO75445 OR4K6P-201ENST00000416478 897 ntBASIC2.29□□□□□ -2.04
USH2AO75445 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC2.29□□□□□ -2.04
USH2AO75445 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC2.29□□□□□ -2.04
USH2AO75445 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC2.29□□□□□ -2.04
USH2AO75445 CDH12P2-201ENST00000504393 298 ntBASIC2.29□□□□□ -2.04
USH2AO75445 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC2.29□□□□□ -2.04
USH2AO75445 SCARNA16.4-201ENST00000516956 187 ntBASIC2.29□□□□□ -2.04
USH2AO75445 AC012339.2-201ENST00000523996 453 ntBASIC2.29□□□□□ -2.04
USH2AO75445 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC2.29□□□□□ -2.04
USH2AO75445 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC2.29□□□□□ -2.04
USH2AO75445 AC027334.1-201ENST00000603257 310 ntBASIC2.29□□□□□ -2.04
USH2AO75445 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
USH2AO75445 SCN5A-203ENST00000413689 8504 ntAPPRIS ALT1 TSL 5 BASIC2.29□□□□□ -2.04
USH2AO75445 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
USH2AO75445 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC2.29□□□□□ -2.04
USH2AO75445 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
USH2AO75445 TRERF1-204ENST00000372922 7286 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
USH2AO75445 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
USH2AO75445 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC2.29□□□□□ -2.04
USH2AO75445 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
USH2AO75445 COL12A1-211ENST00000615798 11579 ntTSL 5 BASIC2.29□□□□□ -2.04
USH2AO75445 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
USH2AO75445 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC2.29□□□□□ -2.04
USH2AO75445 CECR2-206ENST00000612582 9645 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
USH2AO75445 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
USH2AO75445 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC2.29□□□□□ -2.04
USH2AO75445 PCNT-201ENST00000359568 10560 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
USH2AO75445 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
USH2AO75445 SVIL-203ENST00000375400 6729 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
USH2AO75445 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC2.29□□□□□ -2.04
USH2AO75445 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
USH2AO75445 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC2.29□□□□□ -2.04
USH2AO75445 BOLA3P4-201ENST00000418151 400 ntBASIC2.29□□□□□ -2.04
USH2AO75445 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC2.29□□□□□ -2.04
USH2AO75445 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
USH2AO75445 AL022319.1-201ENST00000458183 1167 ntBASIC2.29□□□□□ -2.04
USH2AO75445 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC2.29□□□□□ -2.04
USH2AO75445 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC2.29□□□□□ -2.04
USH2AO75445 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC2.29□□□□□ -2.04
USH2AO75445 AC011471.1-201ENST00000585766 187 ntBASIC2.29□□□□□ -2.04
USH2AO75445 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms