Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC009963.3-201ENST00000458090 486 ntBASIC4.32□□□□□ -1.72
SSSCA1O60232 RNA5SP103-201ENST00000459503 118 ntBASIC4.32□□□□□ -1.72
SSSCA1O60232 RPS4XP12-201ENST00000461747 709 ntBASIC4.32□□□□□ -1.72
SSSCA1O60232 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC4.32□□□□□ -1.72
SSSCA1O60232 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.32□□□□□ -1.72
SSSCA1O60232 RPL29P23-201ENST00000486188 442 ntBASIC4.32□□□□□ -1.72
SSSCA1O60232 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.32□□□□□ -1.72
SSSCA1O60232 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.32□□□□□ -1.72
SSSCA1O60232 MTND6P2-201ENST00000512226 524 ntBASIC4.32□□□□□ -1.72
SSSCA1O60232 AC113191.1-201ENST00000517759 403 ntBASIC4.32□□□□□ -1.72
SSSCA1O60232 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC4.32□□□□□ -1.72
SSSCA1O60232 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC4.32□□□□□ -1.72
SSSCA1O60232 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.32□□□□□ -1.72
SSSCA1O60232 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.32□□□□□ -1.72
SSSCA1O60232 AC002519.2-203ENST00000567043 837 ntBASIC4.32□□□□□ -1.72
SSSCA1O60232 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC4.32□□□□□ -1.72
SSSCA1O60232 RN7SL356P-201ENST00000582228 248 ntBASIC4.32□□□□□ -1.72
SSSCA1O60232 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.32□□□□□ -1.72
SSSCA1O60232 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC4.32□□□□□ -1.72
SSSCA1O60232 MIR6883-201ENST00000614952 78 ntBASIC4.32□□□□□ -1.72
SSSCA1O60232 BNIP3P41-202ENST00000616656 861 ntBASIC4.32□□□□□ -1.72
SSSCA1O60232 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.32□□□□□ -1.72
SSSCA1O60232 AC073869.10-201ENST00000642016 354 ntBASIC4.32□□□□□ -1.72
SSSCA1O60232 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.32□□□□□ -1.72
SSSCA1O60232 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
SSSCA1O60232 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SSSCA1O60232 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.32□□□□□ -1.72
SSSCA1O60232 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.32□□□□□ -1.72
SSSCA1O60232 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
SSSCA1O60232 LINC01355-201ENST00000566551 5444 ntBASIC4.32□□□□□ -1.72
SSSCA1O60232 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SSSCA1O60232 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.32□□□□□ -1.72
SSSCA1O60232 AC023421.1-201ENST00000590535 1785 ntBASIC4.32□□□□□ -1.72
SSSCA1O60232 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SSSCA1O60232 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
SSSCA1O60232 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.31□□□□□ -1.72
SSSCA1O60232 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SSSCA1O60232 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.31□□□□□ -1.72
SSSCA1O60232 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SSSCA1O60232 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SSSCA1O60232 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.31□□□□□ -1.72
SSSCA1O60232 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SSSCA1O60232 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SSSCA1O60232 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.31□□□□□ -1.72
SSSCA1O60232 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SSSCA1O60232 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SSSCA1O60232 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SSSCA1O60232 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SSSCA1O60232 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SSSCA1O60232 EI24P3-201ENST00000399046 1062 ntBASIC4.31□□□□□ -1.72
SSSCA1O60232 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.31□□□□□ -1.72
SSSCA1O60232 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC4.31□□□□□ -1.72
SSSCA1O60232 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC4.31□□□□□ -1.72
SSSCA1O60232 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.31□□□□□ -1.72
SSSCA1O60232 GAPDHP58-201ENST00000438477 1006 ntBASIC4.31□□□□□ -1.72
SSSCA1O60232 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC4.31□□□□□ -1.72
SSSCA1O60232 AL157385.1-201ENST00000446973 268 ntBASIC4.31□□□□□ -1.72
SSSCA1O60232 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.31□□□□□ -1.72
SSSCA1O60232 GAS5-218ENST00000448718 565 ntTSL 2 BASIC4.31□□□□□ -1.72
SSSCA1O60232 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SSSCA1O60232 RN7SL814P-201ENST00000487715 300 ntBASIC4.31□□□□□ -1.72
SSSCA1O60232 NENFP3-201ENST00000503735 313 ntBASIC4.31□□□□□ -1.72
SSSCA1O60232 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC4.31□□□□□ -1.72
SSSCA1O60232 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.31□□□□□ -1.72
SSSCA1O60232 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC4.31□□□□□ -1.72
SSSCA1O60232 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC4.31□□□□□ -1.72
SSSCA1O60232 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.31□□□□□ -1.72
SSSCA1O60232 HMGB1P42-201ENST00000532126 553 ntBASIC4.31□□□□□ -1.72
SSSCA1O60232 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.31□□□□□ -1.72
SSSCA1O60232 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC4.31□□□□□ -1.72
SSSCA1O60232 AC011840.5-201ENST00000582125 771 ntBASIC4.31□□□□□ -1.72
SSSCA1O60232 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC4.31□□□□□ -1.72
SSSCA1O60232 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC4.31□□□□□ -1.72
SSSCA1O60232 APOC2-205ENST00000592257 444 ntTSL 3 BASIC4.31□□□□□ -1.72
SSSCA1O60232 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.31□□□□□ -1.72
SSSCA1O60232 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC4.31□□□□□ -1.72
SSSCA1O60232 uc_338.29-201ENST00000615099 168 ntBASIC4.31□□□□□ -1.72
SSSCA1O60232 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.31□□□□□ -1.72
SSSCA1O60232 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SSSCA1O60232 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.31□□□□□ -1.72
SSSCA1O60232 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SSSCA1O60232 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SSSCA1O60232 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.31□□□□□ -1.72
SSSCA1O60232 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SSSCA1O60232 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.31□□□□□ -1.72
SSSCA1O60232 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SSSCA1O60232 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC4.31□□□□□ -1.72
SSSCA1O60232 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
SSSCA1O60232 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.31□□□□□ -1.72
SSSCA1O60232 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SSSCA1O60232 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SSSCA1O60232 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SSSCA1O60232 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.3□□□□□ -1.72
SSSCA1O60232 AC020633.1-201ENST00000468439 2247 ntBASIC4.3□□□□□ -1.72
SSSCA1O60232 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.3□□□□□ -1.72
SSSCA1O60232 NEPNP-201ENST00000404786 1371 ntBASIC4.3□□□□□ -1.72
SSSCA1O60232 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.3□□□□□ -1.72
SSSCA1O60232 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SSSCA1O60232 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
SSSCA1O60232 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 302.7 ms