Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 LDHBP2-201ENST00000456969 1005 ntBASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 snoU13.29-201ENST00000459370 104 ntBASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 RN7SL466P-201ENST00000497546 295 ntBASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 AC105420.1-201ENST00000504389 582 ntBASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 AC021146.10-201ENST00000515628 706 ntBASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 RN7SKP5-201ENST00000517045 272 ntBASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 DHFRP1-201ENST00000579682 559 ntBASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 AC002069.2-201ENST00000603580 883 ntBASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 AL589674.2-201ENST00000604304 337 ntBASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 RNU6-84P-201ENST00000607737 102 ntBASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 AC003001.2-201ENST00000616294 831 ntBASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 AP000720.1-201ENST00000625091 483 ntBASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 AL049767.1-202ENST00000637826 242 ntBASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 NAMPTP1-201ENST00000440465 2514 ntBASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 CASC19-255ENST00000641733 1385 ntBASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SNX9Q9Y5X1 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
SNX9Q9Y5X1 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
SNX9Q9Y5X1 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
SNX9Q9Y5X1 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.03□□□□□ -1.44
SNX9Q9Y5X1 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SNX9Q9Y5X1 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SNX9Q9Y5X1 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC6.03□□□□□ -1.44
SNX9Q9Y5X1 RNGTTP1-201ENST00000420965 728 ntBASIC6.03□□□□□ -1.44
SNX9Q9Y5X1 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.03□□□□□ -1.44
SNX9Q9Y5X1 MTND2P11-201ENST00000423638 648 ntBASIC6.03□□□□□ -1.44
SNX9Q9Y5X1 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.03□□□□□ -1.44
SNX9Q9Y5X1 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.03□□□□□ -1.44
SNX9Q9Y5X1 NPM1P48-201ENST00000436002 853 ntBASIC6.03□□□□□ -1.44
SNX9Q9Y5X1 KRT8P51-201ENST00000438938 274 ntBASIC6.03□□□□□ -1.44
SNX9Q9Y5X1 AL500527.1-201ENST00000448532 255 ntBASIC6.03□□□□□ -1.44
SNX9Q9Y5X1 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
SNX9Q9Y5X1 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC6.03□□□□□ -1.44
SNX9Q9Y5X1 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.03□□□□□ -1.44
SNX9Q9Y5X1 OR2AF1P-201ENST00000454899 889 ntBASIC6.03□□□□□ -1.44
SNX9Q9Y5X1 PDCL3P4-201ENST00000489621 720 ntBASIC6.03□□□□□ -1.44
SNX9Q9Y5X1 NPM1P28-201ENST00000492269 840 ntBASIC6.03□□□□□ -1.44
SNX9Q9Y5X1 AL133372.1-201ENST00000493565 745 ntBASIC6.03□□□□□ -1.44
SNX9Q9Y5X1 AL136038.1-201ENST00000497246 351 ntBASIC6.03□□□□□ -1.44
SNX9Q9Y5X1 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.03□□□□□ -1.44
SNX9Q9Y5X1 AP001960.1-201ENST00000506494 658 ntBASIC6.03□□□□□ -1.44
SNX9Q9Y5X1 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.03□□□□□ -1.44
SNX9Q9Y5X1 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.03□□□□□ -1.44
SNX9Q9Y5X1 AC067805.1-201ENST00000559344 470 ntBASIC6.03□□□□□ -1.44
SNX9Q9Y5X1 MIR4311-201ENST00000580794 100 ntBASIC6.03□□□□□ -1.44
SNX9Q9Y5X1 MIR1273E-201ENST00000581165 102 ntBASIC6.03□□□□□ -1.44
SNX9Q9Y5X1 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.03□□□□□ -1.44
SNX9Q9Y5X1 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.03□□□□□ -1.44
SNX9Q9Y5X1 AP001267.4-201ENST00000602598 545 ntBASIC6.03□□□□□ -1.44
SNX9Q9Y5X1 FAM72A-208ENST00000607379 1139 ntBASIC6.03□□□□□ -1.44
SNX9Q9Y5X1 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SNX9Q9Y5X1 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SNX9Q9Y5X1 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.03□□□□□ -1.44
SNX9Q9Y5X1 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SNX9Q9Y5X1 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SNX9Q9Y5X1 CASC19-260ENST00000641828 2001 ntBASIC6.03□□□□□ -1.44
SNX9Q9Y5X1 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
SNX9Q9Y5X1 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SNX9Q9Y5X1 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
SNX9Q9Y5X1 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
SNX9Q9Y5X1 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SNX9Q9Y5X1 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SNX9Q9Y5X1 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
SNX9Q9Y5X1 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SNX9Q9Y5X1 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SNX9Q9Y5X1 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SNX9Q9Y5X1 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
SNX9Q9Y5X1 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SNX9Q9Y5X1 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SNX9Q9Y5X1 GAPDHP24-201ENST00000328713 983 ntBASIC6.02□□□□□ -1.45
SNX9Q9Y5X1 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.02□□□□□ -1.45
SNX9Q9Y5X1 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
SNX9Q9Y5X1 MIR323B-201ENST00000385269 82 ntBASIC6.02□□□□□ -1.45
SNX9Q9Y5X1 GAPDHP42-201ENST00000406848 981 ntBASIC6.02□□□□□ -1.45
SNX9Q9Y5X1 RN7SKP279-201ENST00000411383 298 ntBASIC6.02□□□□□ -1.45
SNX9Q9Y5X1 AC096921.1-201ENST00000411661 375 ntBASIC6.02□□□□□ -1.45
SNX9Q9Y5X1 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC6.02□□□□□ -1.45
SNX9Q9Y5X1 AL450023.1-201ENST00000450868 751 ntBASIC6.02□□□□□ -1.45
SNX9Q9Y5X1 VDAC2P4-201ENST00000452925 711 ntBASIC6.02□□□□□ -1.45
SNX9Q9Y5X1 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC6.02□□□□□ -1.45
SNX9Q9Y5X1 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC6.02□□□□□ -1.45
SNX9Q9Y5X1 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC6.02□□□□□ -1.45
SNX9Q9Y5X1 AC089999.1-201ENST00000460336 374 ntBASIC6.02□□□□□ -1.45
SNX9Q9Y5X1 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.02□□□□□ -1.45
SNX9Q9Y5X1 AC113398.2-201ENST00000507630 558 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms