Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC074255.1-201ENST00000511259 501 ntBASIC4.91□□□□□ -1.62
RHBDD3Q9Y3P4 SCARNA6.1-201ENST00000516989 238 ntBASIC4.91□□□□□ -1.62
RHBDD3Q9Y3P4 OR4A17P-201ENST00000526032 904 ntBASIC4.91□□□□□ -1.62
RHBDD3Q9Y3P4 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.91□□□□□ -1.62
RHBDD3Q9Y3P4 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC4.91□□□□□ -1.62
RHBDD3Q9Y3P4 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.91□□□□□ -1.62
RHBDD3Q9Y3P4 AC068305.2-201ENST00000550567 1205 ntBASIC4.91□□□□□ -1.62
RHBDD3Q9Y3P4 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.91□□□□□ -1.62
RHBDD3Q9Y3P4 AC018552.1-201ENST00000562099 811 ntBASIC4.91□□□□□ -1.62
RHBDD3Q9Y3P4 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC4.91□□□□□ -1.62
RHBDD3Q9Y3P4 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
RHBDD3Q9Y3P4 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.91□□□□□ -1.62
RHBDD3Q9Y3P4 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC4.91□□□□□ -1.62
RHBDD3Q9Y3P4 AC018809.2-201ENST00000602436 3823 ntBASIC4.91□□□□□ -1.62
RHBDD3Q9Y3P4 AF117829.2-201ENST00000619538 361 ntBASIC4.91□□□□□ -1.62
RHBDD3Q9Y3P4 AC022919.1-201ENST00000624979 626 ntBASIC4.91□□□□□ -1.62
RHBDD3Q9Y3P4 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.91□□□□□ -1.62
RHBDD3Q9Y3P4 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RHBDD3Q9Y3P4 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.91□□□□□ -1.62
RHBDD3Q9Y3P4 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.91□□□□□ -1.62
RHBDD3Q9Y3P4 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RHBDD3Q9Y3P4 TRIM51GP-201ENST00000534741 1350 ntBASIC4.91□□□□□ -1.62
RHBDD3Q9Y3P4 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.91□□□□□ -1.62
RHBDD3Q9Y3P4 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC4.91□□□□□ -1.62
RHBDD3Q9Y3P4 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC4.9□□□□□ -1.62
RHBDD3Q9Y3P4 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.9□□□□□ -1.62
RHBDD3Q9Y3P4 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
RHBDD3Q9Y3P4 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
RHBDD3Q9Y3P4 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
RHBDD3Q9Y3P4 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.9□□□□□ -1.62
RHBDD3Q9Y3P4 MAPK10-338ENST00000641647 3362 ntBASIC4.9□□□□□ -1.62
RHBDD3Q9Y3P4 AP001029.2-203ENST00000589795 4910 ntBASIC4.9□□□□□ -1.62
RHBDD3Q9Y3P4 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
RHBDD3Q9Y3P4 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
RHBDD3Q9Y3P4 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
RHBDD3Q9Y3P4 AL159987.1-201ENST00000347911 293 ntBASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 AL121886.1-201ENST00000358609 435 ntBASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 RNU1-150P-201ENST00000362491 162 ntBASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 SNORA5.1-201ENST00000384275 131 ntBASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 RNU6-1263P-201ENST00000384601 106 ntBASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 AC066692.1-201ENST00000421721 457 ntBASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 AL035660.1-201ENST00000422041 222 ntBASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 AC115283.1-201ENST00000427353 400 ntBASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 VTI1BP4-201ENST00000427516 527 ntBASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 AL359839.1-201ENST00000451975 1160 ntBASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 RN7SL741P-201ENST00000482473 289 ntBASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 RN7SL570P-201ENST00000484405 292 ntBASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 AC073610.1-201ENST00000489971 396 ntBASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 AC009120.1-201ENST00000493458 473 ntBASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 RN7SKP253-201ENST00000516424 309 ntBASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 AC021678.3-201ENST00000517893 476 ntBASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 AP000648.1-201ENST00000529682 397 ntBASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 AP004609.2-201ENST00000532177 190 ntBASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 AGGF1P7-201ENST00000562369 913 ntBASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 MIR4271-201ENST00000582451 67 ntBASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 AL031601.1-201ENST00000605702 394 ntBASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 AC022960.2-201ENST00000616300 666 ntBASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 AL121890.2-201ENST00000617644 465 ntBASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
RHBDD3Q9Y3P4 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.89□□□□□ -1.63
RHBDD3Q9Y3P4 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RHBDD3Q9Y3P4 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RHBDD3Q9Y3P4 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RHBDD3Q9Y3P4 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.89□□□□□ -1.63
RHBDD3Q9Y3P4 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RHBDD3Q9Y3P4 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RHBDD3Q9Y3P4 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RHBDD3Q9Y3P4 AC004158.1-201ENST00000564508 4319 ntBASIC4.89□□□□□ -1.63
RHBDD3Q9Y3P4 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RHBDD3Q9Y3P4 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.89□□□□□ -1.63
RHBDD3Q9Y3P4 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RHBDD3Q9Y3P4 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RHBDD3Q9Y3P4 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
RHBDD3Q9Y3P4 RN7SKP275-201ENST00000364626 301 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms