Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 AC104260.2-201ENST00000623551 3497 ntBASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TRAPPC4Q9Y296 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
TRAPPC4Q9Y296 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
TRAPPC4Q9Y296 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
TRAPPC4Q9Y296 ABCC13-202ENST00000463099 3842 ntBASIC5.09□□□□□ -1.6
TRAPPC4Q9Y296 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.09□□□□□ -1.6
TRAPPC4Q9Y296 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.09□□□□□ -1.6
TRAPPC4Q9Y296 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
TRAPPC4Q9Y296 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.09□□□□□ -1.6
TRAPPC4Q9Y296 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.09□□□□□ -1.6
TRAPPC4Q9Y296 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
TRAPPC4Q9Y296 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TRAPPC4Q9Y296 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRAPPC4Q9Y296 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.08□□□□□ -1.6
TRAPPC4Q9Y296 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.08□□□□□ -1.6
TRAPPC4Q9Y296 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TRAPPC4Q9Y296 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TRAPPC4Q9Y296 AC007842.1-201ENST00000597336 2039 ntBASIC5.08□□□□□ -1.6
TRAPPC4Q9Y296 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.08□□□□□ -1.6
TRAPPC4Q9Y296 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRAPPC4Q9Y296 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.08□□□□□ -1.6
TRAPPC4Q9Y296 RNA5SP131-201ENST00000365452 119 ntBASIC5.08□□□□□ -1.6
TRAPPC4Q9Y296 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
TRAPPC4Q9Y296 GAPDHP42-201ENST00000406848 981 ntBASIC5.08□□□□□ -1.6
TRAPPC4Q9Y296 NANOGP9-201ENST00000439890 892 ntBASIC5.08□□□□□ -1.6
TRAPPC4Q9Y296 AL450996.1-201ENST00000445574 1202 ntBASIC5.08□□□□□ -1.6
TRAPPC4Q9Y296 AL596266.1-201ENST00000448132 400 ntBASIC5.08□□□□□ -1.6
TRAPPC4Q9Y296 TAAR4P-201ENST00000454843 1039 ntBASIC5.08□□□□□ -1.6
TRAPPC4Q9Y296 AC021660.1-201ENST00000465006 554 ntBASIC5.08□□□□□ -1.6
TRAPPC4Q9Y296 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.08□□□□□ -1.6
TRAPPC4Q9Y296 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.08□□□□□ -1.6
TRAPPC4Q9Y296 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.08□□□□□ -1.6
TRAPPC4Q9Y296 PMS2P3-207ENST00000529061 717 ntBASIC5.08□□□□□ -1.6
TRAPPC4Q9Y296 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.08□□□□□ -1.6
TRAPPC4Q9Y296 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.08□□□□□ -1.6
TRAPPC4Q9Y296 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.08□□□□□ -1.6
TRAPPC4Q9Y296 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.08□□□□□ -1.6
TRAPPC4Q9Y296 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.08□□□□□ -1.6
TRAPPC4Q9Y296 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.08□□□□□ -1.6
TRAPPC4Q9Y296 H3F3BP2-201ENST00000583907 357 ntBASIC5.08□□□□□ -1.6
TRAPPC4Q9Y296 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.08□□□□□ -1.6
TRAPPC4Q9Y296 AC027243.2-201ENST00000602530 724 ntBASIC5.08□□□□□ -1.6
TRAPPC4Q9Y296 AL356608.1-201ENST00000610034 820 ntBASIC5.08□□□□□ -1.6
TRAPPC4Q9Y296 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.08□□□□□ -1.6
TRAPPC4Q9Y296 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.08□□□□□ -1.6
TRAPPC4Q9Y296 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
TRAPPC4Q9Y296 HSPD1P7-201ENST00000447985 1686 ntBASIC5.08□□□□□ -1.6
TRAPPC4Q9Y296 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRAPPC4Q9Y296 AL022311.1-201ENST00000623726 19416 ntBASIC5.08□□□□□ -1.6
TRAPPC4Q9Y296 OR4F13P-202ENST00000560066 2054 ntBASIC5.08□□□□□ -1.6
TRAPPC4Q9Y296 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 AL121886.1-201ENST00000358609 435 ntBASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 RNA5SP510-201ENST00000364697 99 ntBASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 RN7SKP292-201ENST00000365522 317 ntBASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 RNA5SP284-201ENST00000384547 118 ntBASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 RNA5SP241-201ENST00000391326 114 ntBASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 RPS6P23-201ENST00000413224 722 ntBASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 OR2AT2P-201ENST00000413438 905 ntBASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 COX5BP7-201ENST00000414780 274 ntBASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 HSPE1P16-201ENST00000426640 348 ntBASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 BX119321.1-201ENST00000428912 797 ntBASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 AC002069.1-201ENST00000429649 1159 ntBASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 Z84478.1-201ENST00000438230 1219 ntBASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 DUTP7-201ENST00000507982 486 ntBASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 AC090568.1-201ENST00000509499 856 ntBASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 AC016559.2-201ENST00000510759 359 ntBASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 SNORA43.3-201ENST00000517240 103 ntBASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 AC022826.1-201ENST00000519383 805 ntBASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 AC090888.3-201ENST00000558917 509 ntBASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 AP005431.1-201ENST00000618479 319 ntBASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRAPPC4Q9Y296 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms