Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
VTA1Q9NP79 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.77□□□□□ -1.32
VTA1Q9NP79 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.77□□□□□ -1.33
VTA1Q9NP79 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
VTA1Q9NP79 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.77□□□□□ -1.33
VTA1Q9NP79 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
VTA1Q9NP79 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
VTA1Q9NP79 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
VTA1Q9NP79 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
VTA1Q9NP79 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
VTA1Q9NP79 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
VTA1Q9NP79 OR10R3P-201ENST00000361688 942 ntBASIC6.77□□□□□ -1.33
VTA1Q9NP79 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
VTA1Q9NP79 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC6.77□□□□□ -1.33
VTA1Q9NP79 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC6.77□□□□□ -1.33
VTA1Q9NP79 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.77□□□□□ -1.33
VTA1Q9NP79 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.77□□□□□ -1.33
VTA1Q9NP79 AC044797.1-201ENST00000445744 679 ntBASIC6.77□□□□□ -1.33
VTA1Q9NP79 RPL7P61-201ENST00000451721 751 ntBASIC6.77□□□□□ -1.33
VTA1Q9NP79 YWHAEP1-201ENST00000453697 763 ntBASIC6.77□□□□□ -1.33
VTA1Q9NP79 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.77□□□□□ -1.33
VTA1Q9NP79 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.77□□□□□ -1.33
VTA1Q9NP79 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.77□□□□□ -1.33
VTA1Q9NP79 KCTD9P4-201ENST00000526766 1166 ntBASIC6.77□□□□□ -1.33
VTA1Q9NP79 AP005639.1-201ENST00000526939 192 ntBASIC6.77□□□□□ -1.33
VTA1Q9NP79 OR4A40P-201ENST00000533878 948 ntBASIC6.77□□□□□ -1.33
VTA1Q9NP79 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.77□□□□□ -1.33
VTA1Q9NP79 AC090666.1-201ENST00000578241 445 ntBASIC6.77□□□□□ -1.33
VTA1Q9NP79 MIR4509-3-201ENST00000578671 94 ntBASIC6.77□□□□□ -1.33
VTA1Q9NP79 MIR4509-2-201ENST00000583920 94 ntBASIC6.77□□□□□ -1.33
VTA1Q9NP79 AC024589.2-201ENST00000605642 1294 ntBASIC6.77□□□□□ -1.33
VTA1Q9NP79 AP002802.2-201ENST00000605877 235 ntBASIC6.77□□□□□ -1.33
VTA1Q9NP79 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.77□□□□□ -1.33
VTA1Q9NP79 MIR4509-1-201ENST00000618224 94 ntBASIC6.77□□□□□ -1.33
VTA1Q9NP79 AC097655.1-201ENST00000635075 318 ntBASIC6.77□□□□□ -1.33
VTA1Q9NP79 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC6.77□□□□□ -1.33
VTA1Q9NP79 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
VTA1Q9NP79 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
VTA1Q9NP79 AC105749.1-201ENST00000631338 2008 ntBASIC6.77□□□□□ -1.33
VTA1Q9NP79 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.77□□□□□ -1.33
VTA1Q9NP79 AC005261.2-201ENST00000593427 4258 ntBASIC6.77□□□□□ -1.33
VTA1Q9NP79 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.77□□□□□ -1.33
VTA1Q9NP79 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
VTA1Q9NP79 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
VTA1Q9NP79 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
VTA1Q9NP79 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
VTA1Q9NP79 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.77□□□□□ -1.33
VTA1Q9NP79 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
VTA1Q9NP79 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
VTA1Q9NP79 SPATA2P1-201ENST00000431223 2055 ntBASIC6.77□□□□□ -1.33
VTA1Q9NP79 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
VTA1Q9NP79 CCNT2P1-201ENST00000423082 1315 ntBASIC6.76□□□□□ -1.33
VTA1Q9NP79 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
VTA1Q9NP79 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
VTA1Q9NP79 RARSP1-201ENST00000542842 1418 ntBASIC6.76□□□□□ -1.33
VTA1Q9NP79 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.76□□□□□ -1.33
VTA1Q9NP79 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
VTA1Q9NP79 TTC41P-205ENST00000551270 3963 ntBASIC6.76□□□□□ -1.33
VTA1Q9NP79 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
VTA1Q9NP79 AC022905.1-201ENST00000503430 3048 ntBASIC6.76□□□□□ -1.33
VTA1Q9NP79 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.76□□□□□ -1.33
VTA1Q9NP79 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
VTA1Q9NP79 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6.76□□□□□ -1.33
VTA1Q9NP79 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.76□□□□□ -1.33
VTA1Q9NP79 AL513325.1-201ENST00000417716 1034 ntBASIC6.76□□□□□ -1.33
VTA1Q9NP79 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.76□□□□□ -1.33
VTA1Q9NP79 AC126120.1-201ENST00000431082 470 ntBASIC6.76□□□□□ -1.33
VTA1Q9NP79 AC006994.1-201ENST00000438212 839 ntBASIC6.76□□□□□ -1.33
VTA1Q9NP79 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.76□□□□□ -1.33
VTA1Q9NP79 AC104164.3-201ENST00000467363 1258 ntBASIC6.76□□□□□ -1.33
VTA1Q9NP79 CYCSP20-201ENST00000473154 315 ntBASIC6.76□□□□□ -1.33
VTA1Q9NP79 AC116562.1-201ENST00000485355 781 ntBASIC6.76□□□□□ -1.33
VTA1Q9NP79 AC008629.2-201ENST00000503783 483 ntBASIC6.76□□□□□ -1.33
VTA1Q9NP79 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC6.76□□□□□ -1.33
VTA1Q9NP79 GAPDHP71-201ENST00000511530 1003 ntBASIC6.76□□□□□ -1.33
VTA1Q9NP79 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
VTA1Q9NP79 AC118942.1-201ENST00000529674 1035 ntBASIC6.76□□□□□ -1.33
VTA1Q9NP79 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC6.76□□□□□ -1.33
VTA1Q9NP79 AC022404.1-201ENST00000555320 273 ntBASIC6.76□□□□□ -1.33
VTA1Q9NP79 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC6.76□□□□□ -1.33
VTA1Q9NP79 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC6.76□□□□□ -1.33
VTA1Q9NP79 MIR3176-201ENST00000582210 90 ntBASIC6.76□□□□□ -1.33
VTA1Q9NP79 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
VTA1Q9NP79 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC6.76□□□□□ -1.33
VTA1Q9NP79 RPP40P2-201ENST00000603596 712 ntBASIC6.76□□□□□ -1.33
VTA1Q9NP79 AC112503.1-201ENST00000608436 391 ntBASIC6.76□□□□□ -1.33
VTA1Q9NP79 AL512624.1-201ENST00000613638 469 ntBASIC6.76□□□□□ -1.33
VTA1Q9NP79 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC6.76□□□□□ -1.33
VTA1Q9NP79 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
VTA1Q9NP79 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
VTA1Q9NP79 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.76□□□□□ -1.33
VTA1Q9NP79 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
VTA1Q9NP79 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
VTA1Q9NP79 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
VTA1Q9NP79 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
VTA1Q9NP79 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
VTA1Q9NP79 DOCK11P1-201ENST00000553480 5932 ntBASIC6.76□□□□□ -1.33
VTA1Q9NP79 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
VTA1Q9NP79 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
VTA1Q9NP79 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms