Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VRK1Q99986 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.78□□□□□ -1.48
VRK1Q99986 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
VRK1Q99986 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.78□□□□□ -1.48
VRK1Q99986 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
VRK1Q99986 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC5.77□□□□□ -1.48
VRK1Q99986 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.77□□□□□ -1.49
VRK1Q99986 AC009120.2-204ENST00000621548 2032 ntBASIC5.77□□□□□ -1.49
VRK1Q99986 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VRK1Q99986 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VRK1Q99986 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VRK1Q99986 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
VRK1Q99986 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
VRK1Q99986 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VRK1Q99986 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.77□□□□□ -1.49
VRK1Q99986 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VRK1Q99986 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.77□□□□□ -1.49
VRK1Q99986 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VRK1Q99986 AC010894.1-201ENST00000313760 361 ntBASIC5.77□□□□□ -1.49
VRK1Q99986 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VRK1Q99986 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.77□□□□□ -1.49
VRK1Q99986 SNORD116-2-201ENST00000384274 95 ntBASIC5.77□□□□□ -1.49
VRK1Q99986 SNORA70.9-201ENST00000384370 135 ntBASIC5.77□□□□□ -1.49
VRK1Q99986 SNORD116-6-201ENST00000384711 96 ntBASIC5.77□□□□□ -1.49
VRK1Q99986 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
VRK1Q99986 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
VRK1Q99986 AP003170.5-201ENST00000397185 335 ntBASIC5.77□□□□□ -1.49
VRK1Q99986 HMGB3P18-201ENST00000406327 590 ntBASIC5.77□□□□□ -1.49
VRK1Q99986 AC099535.1-201ENST00000408928 371 ntBASIC5.77□□□□□ -1.49
VRK1Q99986 RN7SKP278-201ENST00000410504 342 ntBASIC5.77□□□□□ -1.49
VRK1Q99986 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.77□□□□□ -1.49
VRK1Q99986 RPL23AP85-201ENST00000421838 433 ntBASIC5.77□□□□□ -1.49
VRK1Q99986 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.77□□□□□ -1.49
VRK1Q99986 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.77□□□□□ -1.49
VRK1Q99986 RPS10P21-201ENST00000430654 475 ntBASIC5.77□□□□□ -1.49
VRK1Q99986 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.77□□□□□ -1.49
VRK1Q99986 AC002542.1-201ENST00000440683 193 ntBASIC5.77□□□□□ -1.49
VRK1Q99986 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.77□□□□□ -1.49
VRK1Q99986 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.77□□□□□ -1.49
VRK1Q99986 RBMY2TP-201ENST00000451162 947 ntBASIC5.77□□□□□ -1.49
VRK1Q99986 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.77□□□□□ -1.49
VRK1Q99986 AC107015.1-201ENST00000466902 747 ntBASIC5.77□□□□□ -1.49
VRK1Q99986 RN7SL836P-201ENST00000476140 296 ntBASIC5.77□□□□□ -1.49
VRK1Q99986 RN7SL741P-201ENST00000482473 289 ntBASIC5.77□□□□□ -1.49
VRK1Q99986 RPL7AP23-201ENST00000482625 776 ntBASIC5.77□□□□□ -1.49
VRK1Q99986 RN7SL382P-201ENST00000482631 282 ntBASIC5.77□□□□□ -1.49
VRK1Q99986 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.77□□□□□ -1.49
VRK1Q99986 AC034244.1-201ENST00000507687 207 ntBASIC5.77□□□□□ -1.49
VRK1Q99986 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.77□□□□□ -1.49
VRK1Q99986 KCTD9P4-201ENST00000526766 1166 ntBASIC5.77□□□□□ -1.49
VRK1Q99986 AC007834.2-201ENST00000536310 343 ntBASIC5.77□□□□□ -1.49
VRK1Q99986 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.77□□□□□ -1.49
VRK1Q99986 ZNF321P-202ENST00000550843 495 ntBASIC5.77□□□□□ -1.49
VRK1Q99986 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.77□□□□□ -1.49
VRK1Q99986 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.77□□□□□ -1.49
VRK1Q99986 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
VRK1Q99986 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.77□□□□□ -1.49
VRK1Q99986 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.77□□□□□ -1.49
VRK1Q99986 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.77□□□□□ -1.49
VRK1Q99986 AL035410.2-201ENST00000604963 864 ntBASIC5.77□□□□□ -1.49
VRK1Q99986 AC016877.3-201ENST00000606778 504 ntBASIC5.77□□□□□ -1.49
VRK1Q99986 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.77□□□□□ -1.49
VRK1Q99986 AC009237.15-201ENST00000610252 501 ntBASIC5.77□□□□□ -1.49
VRK1Q99986 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.77□□□□□ -1.49
VRK1Q99986 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.77□□□□□ -1.49
VRK1Q99986 AC010333.3-201ENST00000615100 402 ntBASIC5.77□□□□□ -1.49
VRK1Q99986 U1.41-201ENST00000617626 165 ntBASIC5.77□□□□□ -1.49
VRK1Q99986 AC078883.4-201ENST00000623218 367 ntBASIC5.77□□□□□ -1.49
VRK1Q99986 AC007342.8-201ENST00000623278 678 ntBASIC5.77□□□□□ -1.49
VRK1Q99986 AL121594.5-201ENST00000631724 573 ntBASIC5.77□□□□□ -1.49
VRK1Q99986 AP003399.1-201ENST00000637534 361 ntBASIC5.77□□□□□ -1.49
VRK1Q99986 LINC02211-204ENST00000642024 1070 ntBASIC5.77□□□□□ -1.49
VRK1Q99986 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VRK1Q99986 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.77□□□□□ -1.49
VRK1Q99986 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VRK1Q99986 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.77□□□□□ -1.49
VRK1Q99986 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.77□□□□□ -1.49
VRK1Q99986 AC006511.3-201ENST00000624929 1783 ntBASIC5.77□□□□□ -1.49
VRK1Q99986 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
VRK1Q99986 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.77□□□□□ -1.49
VRK1Q99986 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
VRK1Q99986 ZNF876P-202ENST00000398732 1485 ntBASIC5.77□□□□□ -1.49
VRK1Q99986 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.76□□□□□ -1.49
VRK1Q99986 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
VRK1Q99986 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VRK1Q99986 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
VRK1Q99986 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VRK1Q99986 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
VRK1Q99986 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
VRK1Q99986 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VRK1Q99986 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VRK1Q99986 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.76□□□□□ -1.49
VRK1Q99986 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC5.76□□□□□ -1.49
VRK1Q99986 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VRK1Q99986 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.76□□□□□ -1.49
VRK1Q99986 OR2M1P-201ENST00000318104 951 ntBASIC5.76□□□□□ -1.49
VRK1Q99986 STAG3L4-201ENST00000352103 530 ntBASIC5.76□□□□□ -1.49
VRK1Q99986 RNA5SP65-201ENST00000363166 119 ntBASIC5.76□□□□□ -1.49
VRK1Q99986 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
VRK1Q99986 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms