Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC8.36□□□□□ -1.07
LRCH3Q96II8 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC8.36□□□□□ -1.07
LRCH3Q96II8 AL845331.3-202ENST00000562856 261 ntBASIC8.36□□□□□ -1.07
LRCH3Q96II8 AC022558.2-201ENST00000566841 754 ntTSL 5 BASIC8.36□□□□□ -1.07
LRCH3Q96II8 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC8.36□□□□□ -1.07
LRCH3Q96II8 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC8.36□□□□□ -1.07
LRCH3Q96II8 AC005261.1-201ENST00000601567 712 ntTSL 2 BASIC8.36□□□□□ -1.07
LRCH3Q96II8 AC011453.2-201ENST00000603737 729 ntBASIC8.36□□□□□ -1.07
LRCH3Q96II8 DPPA3P3-201ENST00000603842 430 ntBASIC8.36□□□□□ -1.07
LRCH3Q96II8 AC103710.3-201ENST00000608157 948 ntBASIC8.36□□□□□ -1.07
LRCH3Q96II8 AC104010.1-201ENST00000616889 150 ntBASIC8.36□□□□□ -1.07
LRCH3Q96II8 MIAT_exon5_1.1-201ENST00000618919 149 ntBASIC8.36□□□□□ -1.07
LRCH3Q96II8 AC129778.1-202ENST00000623812 261 ntBASIC8.36□□□□□ -1.07
LRCH3Q96II8 OXSM-209ENST00000626005 309 ntTSL 3 BASIC8.36□□□□□ -1.07
LRCH3Q96II8 AL591379.1-207ENST00000635982 261 ntBASIC8.36□□□□□ -1.07
LRCH3Q96II8 AMYH02020865.1-205ENST00000636189 261 ntBASIC8.36□□□□□ -1.07
LRCH3Q96II8 PPP3R2-202ENST00000636434 1081 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
LRCH3Q96II8 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
LRCH3Q96II8 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
LRCH3Q96II8 MAGEB16-205ENST00000399992 1734 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
LRCH3Q96II8 CPSF7-206ENST00000448745 1749 ntAPPRIS ALT1 TSL 5 BASIC8.36□□□□□ -1.07
LRCH3Q96II8 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
LRCH3Q96II8 STARD5-201ENST00000302824 4871 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
LRCH3Q96II8 AC023283.1-201ENST00000453491 4897 ntTSL 3 BASIC8.36□□□□□ -1.07
LRCH3Q96II8 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
LRCH3Q96II8 AC000099.1-202ENST00000413812 1912 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
LRCH3Q96II8 C2orf91-201ENST00000378711 3721 ntAPPRIS P2 TSL 2 BASIC8.36□□□□□ -1.07
LRCH3Q96II8 TTC21A-205ENST00000440121 3941 ntAPPRIS P3 TSL 2 BASIC8.36□□□□□ -1.07
LRCH3Q96II8 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC8.36□□□□□ -1.07
LRCH3Q96II8 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
LRCH3Q96II8 CDK19-201ENST00000323817 6067 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
LRCH3Q96II8 ZNF655-213ENST00000425063 4624 ntTSL 3 BASIC8.36□□□□□ -1.07
LRCH3Q96II8 NFRKB-202ENST00000524746 4114 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
LRCH3Q96II8 AC092725.2-201ENST00000567658 1389 ntBASIC8.35□□□□□ -1.07
LRCH3Q96II8 PAICS-202ENST00000399688 3297 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
LRCH3Q96II8 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
LRCH3Q96II8 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
LRCH3Q96II8 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LRCH3Q96II8 NUMB-205ENST00000544991 2757 ntTSL 5 BASIC8.35□□□□□ -1.07
LRCH3Q96II8 ARMCX5-206ENST00000604957 4640 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
LRCH3Q96II8 AC020978.6-201ENST00000571197 3177 ntBASIC8.35□□□□□ -1.07
LRCH3Q96II8 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC8.35□□□□□ -1.07
LRCH3Q96II8 KCNJ15-205ENST00000398930 2914 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
LRCH3Q96II8 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC8.35□□□□□ -1.07
LRCH3Q96II8 DRP2-205ENST00000541709 6835 ntAPPRIS ALT1 TSL 2 BASIC8.35□□□□□ -1.07
LRCH3Q96II8 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
LRCH3Q96II8 SLFN11-202ENST00000394566 5030 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
LRCH3Q96II8 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
LRCH3Q96II8 AC092634.1-201ENST00000366505 199 ntBASIC8.35□□□□□ -1.07
LRCH3Q96II8 EI24P3-201ENST00000399046 1062 ntBASIC8.35□□□□□ -1.07
LRCH3Q96II8 HYKK-202ENST00000408962 847 ntTSL 5 BASIC8.35□□□□□ -1.07
LRCH3Q96II8 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC8.35□□□□□ -1.07
LRCH3Q96II8 RNU6-373P-201ENST00000411247 98 ntBASIC8.35□□□□□ -1.07
LRCH3Q96II8 AC006509.1-201ENST00000420788 634 ntBASIC8.35□□□□□ -1.07
LRCH3Q96II8 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC8.35□□□□□ -1.07
LRCH3Q96II8 AL445669.1-201ENST00000426743 755 ntBASIC8.35□□□□□ -1.07
LRCH3Q96II8 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC8.35□□□□□ -1.07
LRCH3Q96II8 RPL35P8-201ENST00000433284 337 ntBASIC8.35□□□□□ -1.07
LRCH3Q96II8 LSM3P3-201ENST00000436601 306 ntBASIC8.35□□□□□ -1.07
LRCH3Q96II8 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC8.35□□□□□ -1.07
LRCH3Q96II8 AC234771.4-201ENST00000441416 730 ntBASIC8.35□□□□□ -1.07
LRCH3Q96II8 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC8.35□□□□□ -1.07
LRCH3Q96II8 EEF1B2P3-201ENST00000447718 678 ntBASIC8.35□□□□□ -1.07
LRCH3Q96II8 CACYBPP2-201ENST00000453625 678 ntBASIC8.35□□□□□ -1.07
LRCH3Q96II8 MRPS21P1-201ENST00000453850 223 ntBASIC8.35□□□□□ -1.07
LRCH3Q96II8 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC8.35□□□□□ -1.07
LRCH3Q96II8 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC8.35□□□□□ -1.07
LRCH3Q96II8 RN7SL153P-201ENST00000486501 292 ntBASIC8.35□□□□□ -1.07
LRCH3Q96II8 GUSBP3-201ENST00000509348 423 ntBASIC8.35□□□□□ -1.07
LRCH3Q96II8 AC005741.1-201ENST00000511094 432 ntBASIC8.35□□□□□ -1.07
LRCH3Q96II8 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC8.35□□□□□ -1.07
LRCH3Q96II8 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC8.35□□□□□ -1.07
LRCH3Q96II8 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC8.35□□□□□ -1.07
LRCH3Q96II8 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC8.35□□□□□ -1.07
LRCH3Q96II8 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC8.35□□□□□ -1.07
LRCH3Q96II8 HYKK-203ENST00000563233 734 ntTSL 2 BASIC8.35□□□□□ -1.07
LRCH3Q96II8 AC087565.1-201ENST00000565061 391 ntTSL 5 BASIC8.35□□□□□ -1.07
LRCH3Q96II8 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LRCH3Q96II8 POLR3GP2-201ENST00000588366 668 ntBASIC8.35□□□□□ -1.07
LRCH3Q96II8 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC8.35□□□□□ -1.07
LRCH3Q96II8 AC080078.3-201ENST00000605407 463 ntBASIC8.35□□□□□ -1.07
LRCH3Q96II8 AC122710.3-201ENST00000606566 541 ntBASIC8.35□□□□□ -1.07
LRCH3Q96II8 AC104237.2-201ENST00000612456 443 ntBASIC8.35□□□□□ -1.07
LRCH3Q96II8 AC015922.4-201ENST00000612568 690 ntBASIC8.35□□□□□ -1.07
LRCH3Q96II8 AC069542.2-201ENST00000624816 216 ntBASIC8.35□□□□□ -1.07
LRCH3Q96II8 PISRT1-201ENST00000626175 531 ntBASIC8.35□□□□□ -1.07
LRCH3Q96II8 SYNE1-206ENST00000367253 5189 ntTSL 5 BASIC8.35□□□□□ -1.07
LRCH3Q96II8 OR6N1-203ENST00000641846 2640 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
LRCH3Q96II8 EXOC4-201ENST00000253861 4185 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LRCH3Q96II8 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC8.35□□□□□ -1.07
LRCH3Q96II8 UGT2B4-206ENST00000512583 1836 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
LRCH3Q96II8 GTF2H1-201ENST00000265963 2982 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LRCH3Q96II8 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
LRCH3Q96II8 ASNSP6-201ENST00000592770 1618 ntBASIC8.35□□□□□ -1.07
LRCH3Q96II8 GNG12-201ENST00000370982 4404 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LRCH3Q96II8 AC024132.1-201ENST00000382007 2509 ntTSL 2 BASIC8.35□□□□□ -1.07
LRCH3Q96II8 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC8.35□□□□□ -1.07
LRCH3Q96II8 AC011447.7-201ENST00000624228 1590 ntBASIC8.35□□□□□ -1.07
LRCH3Q96II8 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC8.35□□□□□ -1.07
LRCH3Q96II8 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms