Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC7.96□□□□□ -1.14
HLA-CQ95604 SNORA81.2-201ENST00000516868 170 ntBASIC7.96□□□□□ -1.14
HLA-CQ95604 IGHV3-63-201ENST00000518422 341 ntBASIC7.96□□□□□ -1.14
HLA-CQ95604 AC044836.1-201ENST00000519514 274 ntBASIC7.96□□□□□ -1.14
HLA-CQ95604 OR5D2P-201ENST00000524390 911 ntBASIC7.96□□□□□ -1.14
HLA-CQ95604 PHBP17-201ENST00000528576 541 ntBASIC7.96□□□□□ -1.14
HLA-CQ95604 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC7.96□□□□□ -1.14
HLA-CQ95604 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC7.96□□□□□ -1.14
HLA-CQ95604 TRAV15-201ENST00000556680 249 ntBASIC7.96□□□□□ -1.14
HLA-CQ95604 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC7.96□□□□□ -1.14
HLA-CQ95604 AC055876.1-202ENST00000567053 138 ntBASIC7.96□□□□□ -1.14
HLA-CQ95604 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC7.96□□□□□ -1.14
HLA-CQ95604 AC024267.2-201ENST00000582737 417 ntBASIC7.96□□□□□ -1.14
HLA-CQ95604 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC7.96□□□□□ -1.14
HLA-CQ95604 AC011921.2-201ENST00000589465 152 ntBASIC7.96□□□□□ -1.14
HLA-CQ95604 AL137000.1-201ENST00000610528 1244 ntBASIC7.96□□□□□ -1.14
HLA-CQ95604 AP006248.2-201ENST00000623309 592 ntBASIC7.96□□□□□ -1.14
HLA-CQ95604 AC138649.5-201ENST00000637456 137 ntBASIC7.96□□□□□ -1.14
HLA-CQ95604 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
HLA-CQ95604 MMP20-201ENST00000260228 1956 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
HLA-CQ95604 AC006378.2-201ENST00000623178 2476 ntBASIC7.96□□□□□ -1.14
HLA-CQ95604 ZNF567-204ENST00000588311 2042 ntTSL 2 BASIC7.96□□□□□ -1.14
HLA-CQ95604 CASC19-260ENST00000641828 2001 ntBASIC7.96□□□□□ -1.14
HLA-CQ95604 NXF5-205ENST00000473265 1348 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.14
HLA-CQ95604 NELL1-203ENST00000357134 3022 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
HLA-CQ95604 AC095038.1-201ENST00000429248 1591 ntBASIC7.96□□□□□ -1.14
HLA-CQ95604 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
HLA-CQ95604 THOC5-216ENST00000490103 4753 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
HLA-CQ95604 TBCK-203ENST00000394706 3349 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
HLA-CQ95604 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
HLA-CQ95604 LRRC37A9P-201ENST00000603850 5376 ntBASIC7.96□□□□□ -1.14
HLA-CQ95604 AC092162.3-201ENST00000624511 1624 ntBASIC7.96□□□□□ -1.14
HLA-CQ95604 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC7.96□□□□□ -1.14
HLA-CQ95604 ERC1-213ENST00000543086 9241 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
HLA-CQ95604 BDNF-216ENST00000532997 3930 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
HLA-CQ95604 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
HLA-CQ95604 GFRAL-201ENST00000340465 1911 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
HLA-CQ95604 ABCA4-207ENST00000536513 3740 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
HLA-CQ95604 HBP1-208ENST00000468410 2704 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
HLA-CQ95604 TTLL9-206ENST00000535842 3261 ntAPPRIS P2 TSL 5 BASIC7.95□□□□□ -1.14
HLA-CQ95604 CCDC162P-214ENST00000640755 1958 ntTSL 5 BASIC7.95□□□□□ -1.14
HLA-CQ95604 CD302-202ENST00000429078 3803 ntTSL 2 BASIC7.95□□□□□ -1.14
HLA-CQ95604 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
HLA-CQ95604 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
HLA-CQ95604 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
HLA-CQ95604 SUPT7L-201ENST00000337768 4488 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
HLA-CQ95604 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC7.95□□□□□ -1.14
HLA-CQ95604 AL049543.1-201ENST00000499525 2874 ntTSL 2 BASIC7.95□□□□□ -1.14
HLA-CQ95604 LINC00927-203ENST00000558913 2878 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
HLA-CQ95604 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
HLA-CQ95604 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
HLA-CQ95604 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
HLA-CQ95604 SNORA30-201ENST00000384028 129 ntBASIC7.95□□□□□ -1.14
HLA-CQ95604 SNORA2C-201ENST00000408564 137 ntBASIC7.95□□□□□ -1.14
HLA-CQ95604 AL355862.1-201ENST00000412705 353 ntBASIC7.95□□□□□ -1.14
HLA-CQ95604 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC7.95□□□□□ -1.14
HLA-CQ95604 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC7.95□□□□□ -1.14
HLA-CQ95604 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC7.95□□□□□ -1.14
HLA-CQ95604 GTF2IP20-201ENST00000431663 360 ntBASIC7.95□□□□□ -1.14
HLA-CQ95604 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC7.95□□□□□ -1.14
HLA-CQ95604 AL031681.1-201ENST00000443304 400 ntBASIC7.95□□□□□ -1.14
HLA-CQ95604 DBIL5P2-201ENST00000443827 253 ntBASIC7.95□□□□□ -1.14
HLA-CQ95604 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC7.95□□□□□ -1.14
HLA-CQ95604 AC093166.3-201ENST00000448785 303 ntBASIC7.95□□□□□ -1.14
HLA-CQ95604 GH2-204ENST00000456543 794 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
HLA-CQ95604 RNU6-420P-201ENST00000458780 107 ntBASIC7.95□□□□□ -1.14
HLA-CQ95604 TDGF1P6-201ENST00000463873 448 ntBASIC7.95□□□□□ -1.14
HLA-CQ95604 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
HLA-CQ95604 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC7.95□□□□□ -1.14
HLA-CQ95604 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
HLA-CQ95604 MINOS1P4-201ENST00000515470 318 ntBASIC7.95□□□□□ -1.14
HLA-CQ95604 RPS20-202ENST00000518875 671 ntTSL 2 BASIC7.95□□□□□ -1.14
HLA-CQ95604 AC008429.4-201ENST00000521201 182 ntBASIC7.95□□□□□ -1.14
HLA-CQ95604 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
HLA-CQ95604 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC7.95□□□□□ -1.14
HLA-CQ95604 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC7.95□□□□□ -1.14
HLA-CQ95604 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
HLA-CQ95604 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC7.95□□□□□ -1.14
HLA-CQ95604 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC7.95□□□□□ -1.14
HLA-CQ95604 AC010287.1-201ENST00000566916 357 ntBASIC7.95□□□□□ -1.14
HLA-CQ95604 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC7.95□□□□□ -1.14
HLA-CQ95604 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC7.95□□□□□ -1.14
HLA-CQ95604 AC122710.3-201ENST00000606566 541 ntBASIC7.95□□□□□ -1.14
HLA-CQ95604 CDC37L1-AS1-201ENST00000607997 463 ntTSL 5 BASIC7.95□□□□□ -1.14
HLA-CQ95604 AP004247.3-201ENST00000608682 624 ntBASIC7.95□□□□□ -1.14
HLA-CQ95604 AC103710.4-201ENST00000609301 899 ntBASIC7.95□□□□□ -1.14
HLA-CQ95604 MIR6778-201ENST00000617912 73 ntBASIC7.95□□□□□ -1.14
HLA-CQ95604 AC012629.3-201ENST00000623397 328 ntBASIC7.95□□□□□ -1.14
HLA-CQ95604 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC7.95□□□□□ -1.14
HLA-CQ95604 AL078596.1-201ENST00000624856 447 ntBASIC7.95□□□□□ -1.14
HLA-CQ95604 RACK1-235ENST00000626067 564 ntTSL 2 BASIC7.95□□□□□ -1.14
HLA-CQ95604 AC063952.1-203ENST00000634410 658 ntBASIC7.95□□□□□ -1.14
HLA-CQ95604 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC7.95□□□□□ -1.14
HLA-CQ95604 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC7.95□□□□□ -1.14
HLA-CQ95604 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
HLA-CQ95604 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
HLA-CQ95604 AC046144.1-201ENST00000478559 1853 ntBASIC7.95□□□□□ -1.14
HLA-CQ95604 AC093768.1-201ENST00000505987 2173 ntBASIC7.95□□□□□ -1.14
HLA-CQ95604 SLC36A3-201ENST00000335230 2456 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
HLA-CQ95604 STAT4-201ENST00000358470 2769 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms