Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC8.82□□□□□ -1
TOPBP1Q92547 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC8.82□□□□□ -1
TOPBP1Q92547 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC8.82□□□□□ -1
TOPBP1Q92547 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
TOPBP1Q92547 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC8.82□□□□□ -1
TOPBP1Q92547 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC8.82□□□□□ -1
TOPBP1Q92547 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC8.82□□□□□ -1
TOPBP1Q92547 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC8.82□□□□□ -1
TOPBP1Q92547 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC8.82□□□□□ -1
TOPBP1Q92547 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
TOPBP1Q92547 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
TOPBP1Q92547 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC8.81□□□□□ -1
TOPBP1Q92547 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
TOPBP1Q92547 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
TOPBP1Q92547 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
TOPBP1Q92547 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
TOPBP1Q92547 CHIAP3-201ENST00000423668 1133 ntBASIC8.81□□□□□ -1
TOPBP1Q92547 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC8.81□□□□□ -1
TOPBP1Q92547 AC096754.1-201ENST00000508904 818 ntBASIC8.81□□□□□ -1
TOPBP1Q92547 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC8.81□□□□□ -1
TOPBP1Q92547 RN7SKP122-201ENST00000515923 296 ntBASIC8.81□□□□□ -1
TOPBP1Q92547 ARL6IP1P3-201ENST00000524544 560 ntBASIC8.81□□□□□ -1
TOPBP1Q92547 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
TOPBP1Q92547 AC005034.3-201ENST00000604845 1747 ntBASIC8.81□□□□□ -1
TOPBP1Q92547 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC8.81□□□□□ -1
TOPBP1Q92547 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
TOPBP1Q92547 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
TOPBP1Q92547 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC8.81□□□□□ -1
TOPBP1Q92547 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC8.81□□□□□ -1
TOPBP1Q92547 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC8.81□□□□□ -1
TOPBP1Q92547 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
TOPBP1Q92547 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC8.81□□□□□ -1
TOPBP1Q92547 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
TOPBP1Q92547 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC8.81□□□□□ -1
TOPBP1Q92547 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
TOPBP1Q92547 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
TOPBP1Q92547 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
TOPBP1Q92547 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
TOPBP1Q92547 PARN-201ENST00000341484 2100 ntTSL 2 BASIC8.8□□□□□ -1
TOPBP1Q92547 AL121977.1-201ENST00000401636 979 ntBASIC8.8□□□□□ -1
TOPBP1Q92547 RN7SKP114-201ENST00000410327 279 ntBASIC8.8□□□□□ -1
TOPBP1Q92547 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC8.8□□□□□ -1
TOPBP1Q92547 GTF2IP2-201ENST00000424290 697 ntBASIC8.8□□□□□ -1
TOPBP1Q92547 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC8.8□□□□□ -1
TOPBP1Q92547 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC8.8□□□□□ -1
TOPBP1Q92547 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC8.8□□□□□ -1
TOPBP1Q92547 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC8.8□□□□□ -1
TOPBP1Q92547 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC8.8□□□□□ -1
TOPBP1Q92547 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC8.8□□□□□ -1
TOPBP1Q92547 AL512782.1-201ENST00000603093 364 ntBASIC8.8□□□□□ -1
TOPBP1Q92547 AL162431.4-201ENST00000604674 411 ntBASIC8.8□□□□□ -1
TOPBP1Q92547 AL683813.2-201ENST00000605245 502 ntBASIC8.8□□□□□ -1
TOPBP1Q92547 AC091932.2-201ENST00000623014 291 ntBASIC8.8□□□□□ -1
TOPBP1Q92547 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC8.8□□□□□ -1
TOPBP1Q92547 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC8.8□□□□□ -1
TOPBP1Q92547 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC8.8□□□□□ -1
TOPBP1Q92547 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC8.8□□□□□ -1
TOPBP1Q92547 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC8.8□□□□□ -1
TOPBP1Q92547 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
TOPBP1Q92547 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
TOPBP1Q92547 HNRNPA1P54-201ENST00000411857 9714 ntBASIC8.8□□□□□ -1
TOPBP1Q92547 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
TOPBP1Q92547 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
TOPBP1Q92547 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
TOPBP1Q92547 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
TOPBP1Q92547 RNA5SP191-201ENST00000362585 102 ntBASIC8.8□□□□□ -1
TOPBP1Q92547 RNA5SP90-201ENST00000364801 99 ntBASIC8.8□□□□□ -1
TOPBP1Q92547 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
TOPBP1Q92547 OR10T1P-201ENST00000424327 947 ntBASIC8.8□□□□□ -1
TOPBP1Q92547 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC8.8□□□□□ -1
TOPBP1Q92547 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC8.8□□□□□ -1
TOPBP1Q92547 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC8.8□□□□□ -1
TOPBP1Q92547 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC8.8□□□□□ -1
TOPBP1Q92547 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC8.8□□□□□ -1
TOPBP1Q92547 SNORD125-201ENST00000459538 96 ntBASIC8.8□□□□□ -1
TOPBP1Q92547 SLC25A51P1-201ENST00000468432 871 ntBASIC8.8□□□□□ -1
TOPBP1Q92547 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC8.8□□□□□ -1
TOPBP1Q92547 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC8.8□□□□□ -1
TOPBP1Q92547 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC8.8□□□□□ -1
TOPBP1Q92547 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC8.8□□□□□ -1
TOPBP1Q92547 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC8.8□□□□□ -1
TOPBP1Q92547 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC8.79□□□□□ -1
TOPBP1Q92547 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
TOPBP1Q92547 ATP5A1P1-201ENST00000454088 1321 ntBASIC8.79□□□□□ -1
TOPBP1Q92547 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
TOPBP1Q92547 UG0898H09-202ENST00000623646 7040 ntBASIC8.79□□□□□ -1
TOPBP1Q92547 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC8.79□□□□□ -1
TOPBP1Q92547 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC8.79□□□□□ -1
TOPBP1Q92547 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
TOPBP1Q92547 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC8.79□□□□□ -1
TOPBP1Q92547 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
TOPBP1Q92547 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
TOPBP1Q92547 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
TOPBP1Q92547 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC8.79□□□□□ -1
TOPBP1Q92547 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
TOPBP1Q92547 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC8.79□□□□□ -1
TOPBP1Q92547 HMGB3P7-201ENST00000400214 611 ntBASIC8.79□□□□□ -1
TOPBP1Q92547 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC8.79□□□□□ -1
TOPBP1Q92547 RN7SKP98-201ENST00000517070 156 ntBASIC8.79□□□□□ -1
TOPBP1Q92547 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC8.79□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms