Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
HMGB4Q8WW32 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HMGB4Q8WW32 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HMGB4Q8WW32 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
HMGB4Q8WW32 AC073365.1-203ENST00000641055 1992 ntBASIC5.93□□□□□ -1.46
HMGB4Q8WW32 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
HMGB4Q8WW32 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HMGB4Q8WW32 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HMGB4Q8WW32 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HMGB4Q8WW32 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HMGB4Q8WW32 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.93□□□□□ -1.46
HMGB4Q8WW32 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.93□□□□□ -1.46
HMGB4Q8WW32 RN7SKP162-201ENST00000363605 345 ntBASIC5.93□□□□□ -1.46
HMGB4Q8WW32 MIR620-201ENST00000385232 95 ntBASIC5.93□□□□□ -1.46
HMGB4Q8WW32 GSTA12P-201ENST00000402398 508 ntBASIC5.93□□□□□ -1.46
HMGB4Q8WW32 TNPO1P1-201ENST00000423641 1138 ntBASIC5.93□□□□□ -1.46
HMGB4Q8WW32 CLUHP1-201ENST00000435012 1190 ntBASIC5.93□□□□□ -1.46
HMGB4Q8WW32 AL451136.1-201ENST00000435399 325 ntBASIC5.93□□□□□ -1.46
HMGB4Q8WW32 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HMGB4Q8WW32 SNRPFP2-201ENST00000440710 251 ntBASIC5.93□□□□□ -1.46
HMGB4Q8WW32 AL022237.1-201ENST00000446663 358 ntBASIC5.93□□□□□ -1.46
HMGB4Q8WW32 AC103563.5-201ENST00000455643 364 ntBASIC5.93□□□□□ -1.46
HMGB4Q8WW32 AL133445.1-201ENST00000467051 452 ntBASIC5.93□□□□□ -1.46
HMGB4Q8WW32 AC119751.4-201ENST00000507498 357 ntBASIC5.93□□□□□ -1.46
HMGB4Q8WW32 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.93□□□□□ -1.46
HMGB4Q8WW32 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.93□□□□□ -1.46
HMGB4Q8WW32 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.93□□□□□ -1.46
HMGB4Q8WW32 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.93□□□□□ -1.46
HMGB4Q8WW32 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.93□□□□□ -1.46
HMGB4Q8WW32 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.93□□□□□ -1.46
HMGB4Q8WW32 AL049872.1-201ENST00000556323 322 ntBASIC5.93□□□□□ -1.46
HMGB4Q8WW32 AC018558.5-201ENST00000565840 952 ntBASIC5.93□□□□□ -1.46
HMGB4Q8WW32 AC090651.1-201ENST00000567865 634 ntBASIC5.93□□□□□ -1.46
HMGB4Q8WW32 AC104072.1-201ENST00000568817 668 ntBASIC5.93□□□□□ -1.46
HMGB4Q8WW32 GARSP1-201ENST00000570895 719 ntBASIC5.93□□□□□ -1.46
HMGB4Q8WW32 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.93□□□□□ -1.46
HMGB4Q8WW32 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.93□□□□□ -1.46
HMGB4Q8WW32 AC006116.7-201ENST00000590141 756 ntBASIC5.93□□□□□ -1.46
HMGB4Q8WW32 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.93□□□□□ -1.46
HMGB4Q8WW32 AC011497.2-201ENST00000600255 639 ntBASIC5.93□□□□□ -1.46
HMGB4Q8WW32 AC024589.2-201ENST00000605642 1294 ntBASIC5.93□□□□□ -1.46
HMGB4Q8WW32 AC211433.2-201ENST00000608433 387 ntBASIC5.93□□□□□ -1.46
HMGB4Q8WW32 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.93□□□□□ -1.46
HMGB4Q8WW32 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.93□□□□□ -1.46
HMGB4Q8WW32 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.93□□□□□ -1.46
HMGB4Q8WW32 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.93□□□□□ -1.46
HMGB4Q8WW32 AL355377.1-201ENST00000621125 1653 ntBASIC5.93□□□□□ -1.46
HMGB4Q8WW32 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
HMGB4Q8WW32 AOX3P-204ENST00000491025 2107 ntBASIC5.93□□□□□ -1.46
HMGB4Q8WW32 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.93□□□□□ -1.46
HMGB4Q8WW32 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
HMGB4Q8WW32 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HMGB4Q8WW32 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HMGB4Q8WW32 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HMGB4Q8WW32 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 AC020656.2-201ENST00000613291 5309 ntBASIC5.92□□□□□ -1.46
HMGB4Q8WW32 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 GAPDHP24-201ENST00000328713 983 ntBASIC5.92□□□□□ -1.46
HMGB4Q8WW32 ATP5F1P6-201ENST00000402768 767 ntBASIC5.92□□□□□ -1.46
HMGB4Q8WW32 RN7SKP59-201ENST00000410520 314 ntBASIC5.92□□□□□ -1.46
HMGB4Q8WW32 OR6E1P-201ENST00000414424 923 ntBASIC5.92□□□□□ -1.46
HMGB4Q8WW32 MTND4LP17-201ENST00000414607 293 ntBASIC5.92□□□□□ -1.46
HMGB4Q8WW32 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.92□□□□□ -1.46
HMGB4Q8WW32 BMS1P17-202ENST00000416720 316 ntBASIC5.92□□□□□ -1.46
HMGB4Q8WW32 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 AC092570.3-201ENST00000420113 693 ntBASIC5.92□□□□□ -1.46
HMGB4Q8WW32 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 RN7SL72P-201ENST00000460697 269 ntBASIC5.92□□□□□ -1.46
HMGB4Q8WW32 RN7SL515P-201ENST00000463999 297 ntBASIC5.92□□□□□ -1.46
HMGB4Q8WW32 AC108693.1-201ENST00000496068 432 ntBASIC5.92□□□□□ -1.46
HMGB4Q8WW32 CCDC11P1-201ENST00000503137 1162 ntBASIC5.92□□□□□ -1.46
HMGB4Q8WW32 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 AC010374.2-201ENST00000512933 535 ntBASIC5.92□□□□□ -1.46
HMGB4Q8WW32 RNU6-615P-201ENST00000516065 106 ntBASIC5.92□□□□□ -1.46
HMGB4Q8WW32 RNA5SP34-201ENST00000516887 130 ntBASIC5.92□□□□□ -1.46
HMGB4Q8WW32 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 HMGB1P42-201ENST00000532126 553 ntBASIC5.92□□□□□ -1.46
HMGB4Q8WW32 AC068339.2-201ENST00000534395 618 ntBASIC5.92□□□□□ -1.46
HMGB4Q8WW32 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.92□□□□□ -1.46
HMGB4Q8WW32 IGBP1P1-201ENST00000554337 1009 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms