Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.09□□□□□ -1.59
C9orf40Q8IXQ3 RPL7L1P4-201ENST00000513004 707 ntBASIC5.09□□□□□ -1.59
C9orf40Q8IXQ3 ATP5LP3-201ENST00000514223 304 ntBASIC5.09□□□□□ -1.59
C9orf40Q8IXQ3 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.09□□□□□ -1.59
C9orf40Q8IXQ3 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.09□□□□□ -1.59
C9orf40Q8IXQ3 AC090286.3-201ENST00000573133 187 ntBASIC5.09□□□□□ -1.59
C9orf40Q8IXQ3 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.09□□□□□ -1.59
C9orf40Q8IXQ3 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.09□□□□□ -1.59
C9orf40Q8IXQ3 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.09□□□□□ -1.59
C9orf40Q8IXQ3 AC000068.2-201ENST00000608816 460 ntBASIC5.09□□□□□ -1.59
C9orf40Q8IXQ3 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
C9orf40Q8IXQ3 MIR6886-201ENST00000619864 61 ntBASIC5.09□□□□□ -1.59
C9orf40Q8IXQ3 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.09□□□□□ -1.59
C9orf40Q8IXQ3 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
C9orf40Q8IXQ3 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
C9orf40Q8IXQ3 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
C9orf40Q8IXQ3 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
C9orf40Q8IXQ3 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
C9orf40Q8IXQ3 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
C9orf40Q8IXQ3 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.09□□□□□ -1.6
C9orf40Q8IXQ3 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.09□□□□□ -1.6
C9orf40Q8IXQ3 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
C9orf40Q8IXQ3 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
C9orf40Q8IXQ3 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.6
C9orf40Q8IXQ3 AC010266.2-201ENST00000564741 3255 ntBASIC5.08□□□□□ -1.6
C9orf40Q8IXQ3 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
C9orf40Q8IXQ3 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.08□□□□□ -1.6
C9orf40Q8IXQ3 MTCO1P11-201ENST00000429111 1528 ntBASIC5.08□□□□□ -1.6
C9orf40Q8IXQ3 CR383656.5-201ENST00000547616 1340 ntBASIC5.08□□□□□ -1.6
C9orf40Q8IXQ3 AL158827.1-201ENST00000416300 391 ntBASIC5.08□□□□□ -1.6
C9orf40Q8IXQ3 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.08□□□□□ -1.6
C9orf40Q8IXQ3 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.08□□□□□ -1.6
C9orf40Q8IXQ3 MTND4LP12-201ENST00000448237 295 ntBASIC5.08□□□□□ -1.6
C9orf40Q8IXQ3 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.08□□□□□ -1.6
C9orf40Q8IXQ3 RN7SL188P-201ENST00000469842 285 ntBASIC5.08□□□□□ -1.6
C9orf40Q8IXQ3 SIAH1P1-201ENST00000479411 923 ntBASIC5.08□□□□□ -1.6
C9orf40Q8IXQ3 AC108693.1-201ENST00000496068 432 ntBASIC5.08□□□□□ -1.6
C9orf40Q8IXQ3 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
C9orf40Q8IXQ3 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.08□□□□□ -1.6
C9orf40Q8IXQ3 AC138832.1-201ENST00000522871 556 ntBASIC5.08□□□□□ -1.6
C9orf40Q8IXQ3 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.08□□□□□ -1.6
C9orf40Q8IXQ3 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.08□□□□□ -1.6
C9orf40Q8IXQ3 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.08□□□□□ -1.6
C9orf40Q8IXQ3 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.08□□□□□ -1.6
C9orf40Q8IXQ3 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.08□□□□□ -1.6
C9orf40Q8IXQ3 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.08□□□□□ -1.6
C9orf40Q8IXQ3 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
C9orf40Q8IXQ3 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.08□□□□□ -1.6
C9orf40Q8IXQ3 RN7SL753P-201ENST00000581238 290 ntBASIC5.08□□□□□ -1.6
C9orf40Q8IXQ3 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.08□□□□□ -1.6
C9orf40Q8IXQ3 AL359513.1-201ENST00000614364 557 ntBASIC5.08□□□□□ -1.6
C9orf40Q8IXQ3 AC005840.5-201ENST00000619166 599 ntBASIC5.08□□□□□ -1.6
C9orf40Q8IXQ3 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.08□□□□□ -1.6
C9orf40Q8IXQ3 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.08□□□□□ -1.6
C9orf40Q8IXQ3 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.08□□□□□ -1.6
C9orf40Q8IXQ3 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.08□□□□□ -1.6
C9orf40Q8IXQ3 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
C9orf40Q8IXQ3 AC114774.1-201ENST00000507410 1770 ntBASIC5.08□□□□□ -1.6
C9orf40Q8IXQ3 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
C9orf40Q8IXQ3 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
C9orf40Q8IXQ3 AC083899.1-201ENST00000454465 3819 ntBASIC5.08□□□□□ -1.6
C9orf40Q8IXQ3 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
C9orf40Q8IXQ3 AC139426.3-201ENST00000605648 2059 ntBASIC5.08□□□□□ -1.6
C9orf40Q8IXQ3 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.08□□□□□ -1.6
C9orf40Q8IXQ3 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
C9orf40Q8IXQ3 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
C9orf40Q8IXQ3 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
C9orf40Q8IXQ3 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
C9orf40Q8IXQ3 AC004158.1-201ENST00000564508 4319 ntBASIC5.07□□□□□ -1.6
C9orf40Q8IXQ3 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
C9orf40Q8IXQ3 TCP11X1-202ENST00000622971 1372 ntBASIC5.07□□□□□ -1.6
C9orf40Q8IXQ3 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.07□□□□□ -1.6
C9orf40Q8IXQ3 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
C9orf40Q8IXQ3 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
C9orf40Q8IXQ3 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
C9orf40Q8IXQ3 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.07□□□□□ -1.6
C9orf40Q8IXQ3 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
C9orf40Q8IXQ3 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
C9orf40Q8IXQ3 SNORA51.1-201ENST00000363243 140 ntBASIC5.07□□□□□ -1.6
C9orf40Q8IXQ3 MIR323B-201ENST00000385269 82 ntBASIC5.07□□□□□ -1.6
C9orf40Q8IXQ3 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.07□□□□□ -1.6
C9orf40Q8IXQ3 RN7SKP59-201ENST00000410520 314 ntBASIC5.07□□□□□ -1.6
C9orf40Q8IXQ3 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.07□□□□□ -1.6
C9orf40Q8IXQ3 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.07□□□□□ -1.6
C9orf40Q8IXQ3 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.07□□□□□ -1.6
C9orf40Q8IXQ3 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.07□□□□□ -1.6
C9orf40Q8IXQ3 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.07□□□□□ -1.6
C9orf40Q8IXQ3 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
C9orf40Q8IXQ3 EIF3LP3-201ENST00000495197 822 ntBASIC5.07□□□□□ -1.6
C9orf40Q8IXQ3 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.07□□□□□ -1.6
C9orf40Q8IXQ3 GLUD1P3-202ENST00000508551 200 ntBASIC5.07□□□□□ -1.6
C9orf40Q8IXQ3 AC021106.1-201ENST00000509020 1058 ntBASIC5.07□□□□□ -1.6
C9orf40Q8IXQ3 MTND6P2-201ENST00000512226 524 ntBASIC5.07□□□□□ -1.6
C9orf40Q8IXQ3 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.07□□□□□ -1.6
C9orf40Q8IXQ3 IGKV2-18-201ENST00000522607 343 ntBASIC5.07□□□□□ -1.6
C9orf40Q8IXQ3 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.07□□□□□ -1.6
C9orf40Q8IXQ3 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.07□□□□□ -1.6
C9orf40Q8IXQ3 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
C9orf40Q8IXQ3 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
C9orf40Q8IXQ3 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms