Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.33□□□□□ -1.4
HERC6Q8IVU3 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.33□□□□□ -1.4
HERC6Q8IVU3 NDUFB5P1-201ENST00000508134 564 ntBASIC6.33□□□□□ -1.4
HERC6Q8IVU3 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.33□□□□□ -1.4
HERC6Q8IVU3 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC6.33□□□□□ -1.4
HERC6Q8IVU3 MIMT1-201ENST00000597105 1050 ntBASIC6.33□□□□□ -1.4
HERC6Q8IVU3 SUGT1P3-202ENST00000604259 383 ntBASIC6.33□□□□□ -1.4
HERC6Q8IVU3 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.33□□□□□ -1.4
HERC6Q8IVU3 AC005972.3-201ENST00000606304 481 ntBASIC6.33□□□□□ -1.4
HERC6Q8IVU3 AL021368.3-201ENST00000607119 578 ntBASIC6.33□□□□□ -1.4
HERC6Q8IVU3 AL133370.2-201ENST00000619934 439 ntBASIC6.33□□□□□ -1.4
HERC6Q8IVU3 AC080188.3-201ENST00000624842 748 ntBASIC6.33□□□□□ -1.4
HERC6Q8IVU3 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HERC6Q8IVU3 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HERC6Q8IVU3 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
HERC6Q8IVU3 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HERC6Q8IVU3 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
HERC6Q8IVU3 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HERC6Q8IVU3 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HERC6Q8IVU3 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HERC6Q8IVU3 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HERC6Q8IVU3 AC096921.2-201ENST00000561507 1916 ntBASIC6.33□□□□□ -1.4
HERC6Q8IVU3 SAMM50P1-201ENST00000455403 1399 ntBASIC6.32□□□□□ -1.4
HERC6Q8IVU3 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
HERC6Q8IVU3 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HERC6Q8IVU3 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC6.32□□□□□ -1.4
HERC6Q8IVU3 AL591135.1-201ENST00000401578 5914 ntBASIC6.32□□□□□ -1.4
HERC6Q8IVU3 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
HERC6Q8IVU3 RN7SKP125-201ENST00000410481 302 ntBASIC6.32□□□□□ -1.4
HERC6Q8IVU3 RMRPP5-201ENST00000411156 267 ntBASIC6.32□□□□□ -1.4
HERC6Q8IVU3 AL034379.1-201ENST00000423216 253 ntBASIC6.32□□□□□ -1.4
HERC6Q8IVU3 MTCO1P51-201ENST00000427672 1060 ntBASIC6.32□□□□□ -1.4
HERC6Q8IVU3 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC6.32□□□□□ -1.4
HERC6Q8IVU3 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.32□□□□□ -1.4
HERC6Q8IVU3 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HERC6Q8IVU3 RPL12P3-201ENST00000440080 396 ntBASIC6.32□□□□□ -1.4
HERC6Q8IVU3 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC6.32□□□□□ -1.4
HERC6Q8IVU3 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.32□□□□□ -1.4
HERC6Q8IVU3 AL450996.1-201ENST00000445574 1202 ntBASIC6.32□□□□□ -1.4
HERC6Q8IVU3 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.32□□□□□ -1.4
HERC6Q8IVU3 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC6.32□□□□□ -1.4
HERC6Q8IVU3 AC103563.5-201ENST00000455643 364 ntBASIC6.32□□□□□ -1.4
HERC6Q8IVU3 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HERC6Q8IVU3 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC6.32□□□□□ -1.4
HERC6Q8IVU3 CDH12P4-201ENST00000517835 295 ntBASIC6.32□□□□□ -1.4
HERC6Q8IVU3 CDH12P3-201ENST00000517935 295 ntBASIC6.32□□□□□ -1.4
HERC6Q8IVU3 CDH12P1-201ENST00000518435 295 ntBASIC6.32□□□□□ -1.4
HERC6Q8IVU3 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.32□□□□□ -1.4
HERC6Q8IVU3 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.32□□□□□ -1.4
HERC6Q8IVU3 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.32□□□□□ -1.4
HERC6Q8IVU3 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.32□□□□□ -1.4
HERC6Q8IVU3 ASB8-215ENST00000540782 659 ntTSL 3 BASIC6.32□□□□□ -1.4
HERC6Q8IVU3 HMGN2P6-201ENST00000551091 273 ntBASIC6.32□□□□□ -1.4
HERC6Q8IVU3 TXNP4-201ENST00000575018 310 ntBASIC6.32□□□□□ -1.4
HERC6Q8IVU3 AC040174.2-201ENST00000602701 465 ntBASIC6.32□□□□□ -1.4
HERC6Q8IVU3 AC012213.4-201ENST00000606457 354 ntBASIC6.32□□□□□ -1.4
HERC6Q8IVU3 AL445222.1-201ENST00000607259 628 ntBASIC6.32□□□□□ -1.4
HERC6Q8IVU3 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.32□□□□□ -1.4
HERC6Q8IVU3 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HERC6Q8IVU3 AC241377.1-201ENST00000619797 406 ntBASIC6.32□□□□□ -1.4
HERC6Q8IVU3 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC6.32□□□□□ -1.4
HERC6Q8IVU3 MRE11P1-201ENST00000464884 2127 ntBASIC6.32□□□□□ -1.4
HERC6Q8IVU3 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HERC6Q8IVU3 BX284613.1-201ENST00000452221 1641 ntBASIC6.32□□□□□ -1.4
HERC6Q8IVU3 AC007842.1-201ENST00000597336 2039 ntBASIC6.32□□□□□ -1.4
HERC6Q8IVU3 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HERC6Q8IVU3 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.31□□□□□ -1.4
HERC6Q8IVU3 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HERC6Q8IVU3 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HERC6Q8IVU3 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HERC6Q8IVU3 AC092724.1-201ENST00000624623 3397 ntBASIC6.31□□□□□ -1.4
HERC6Q8IVU3 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.31□□□□□ -1.4
HERC6Q8IVU3 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.31□□□□□ -1.4
HERC6Q8IVU3 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.31□□□□□ -1.4
HERC6Q8IVU3 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.31□□□□□ -1.4
HERC6Q8IVU3 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HERC6Q8IVU3 AC103591.2-201ENST00000265259 766 ntBASIC6.31□□□□□ -1.4
HERC6Q8IVU3 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HERC6Q8IVU3 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.31□□□□□ -1.4
HERC6Q8IVU3 AC005042.1-201ENST00000393397 800 ntBASIC6.31□□□□□ -1.4
HERC6Q8IVU3 HMGA1P8-201ENST00000414130 321 ntBASIC6.31□□□□□ -1.4
HERC6Q8IVU3 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.31□□□□□ -1.4
HERC6Q8IVU3 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.31□□□□□ -1.4
HERC6Q8IVU3 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.31□□□□□ -1.4
HERC6Q8IVU3 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.31□□□□□ -1.4
HERC6Q8IVU3 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.31□□□□□ -1.4
HERC6Q8IVU3 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.31□□□□□ -1.4
HERC6Q8IVU3 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.31□□□□□ -1.4
HERC6Q8IVU3 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.31□□□□□ -1.4
HERC6Q8IVU3 RPS27AP3-201ENST00000453803 454 ntBASIC6.31□□□□□ -1.4
HERC6Q8IVU3 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.31□□□□□ -1.4
HERC6Q8IVU3 RN7SL165P-201ENST00000477476 291 ntBASIC6.31□□□□□ -1.4
HERC6Q8IVU3 AC009120.1-201ENST00000493458 473 ntBASIC6.31□□□□□ -1.4
HERC6Q8IVU3 RN7SL808P-201ENST00000496066 299 ntBASIC6.31□□□□□ -1.4
HERC6Q8IVU3 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC6.31□□□□□ -1.4
HERC6Q8IVU3 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC6.31□□□□□ -1.4
HERC6Q8IVU3 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HERC6Q8IVU3 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.31□□□□□ -1.4
HERC6Q8IVU3 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC6.31□□□□□ -1.4
HERC6Q8IVU3 RN7SKP67-201ENST00000515905 235 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms