Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
CROCCP3Q8IVE0 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CROCCP3Q8IVE0 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.1□□□□□ -1.59
CROCCP3Q8IVE0 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 AC093225.1-201ENST00000506867 1408 ntBASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 RPL36AP10-201ENST00000421785 322 ntBASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 AC090804.1-201ENST00000448870 490 ntBASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 AL133351.3-201ENST00000454998 193 ntBASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 RPS12P20-201ENST00000464109 380 ntBASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 AC007688.1-201ENST00000475592 759 ntBASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 MINOS1P4-201ENST00000515470 318 ntBASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 RNU6-760P-201ENST00000516078 97 ntBASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 AL731537.2-201ENST00000561565 951 ntBASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 AC005632.2-201ENST00000564271 828 ntBASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 AC006120.1-201ENST00000579375 546 ntBASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 FAM106CP-201ENST00000582212 507 ntBASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 AC068768.2-201ENST00000602352 343 ntBASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 AC104307.1-201ENST00000616142 196 ntBASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 RMST_5.1-201ENST00000618704 126 ntBASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 AL158062.1-201ENST00000619632 745 ntBASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 AC015722.2-201ENST00000622210 551 ntBASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 AC073488.3-201ENST00000631611 778 ntBASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CROCCP3Q8IVE0 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.09□□□□□ -1.6
CROCCP3Q8IVE0 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CROCCP3Q8IVE0 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CROCCP3Q8IVE0 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.08□□□□□ -1.6
CROCCP3Q8IVE0 LYARP1-201ENST00000436977 1501 ntBASIC5.08□□□□□ -1.6
CROCCP3Q8IVE0 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.08□□□□□ -1.6
CROCCP3Q8IVE0 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CROCCP3Q8IVE0 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CROCCP3Q8IVE0 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.08□□□□□ -1.6
CROCCP3Q8IVE0 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CROCCP3Q8IVE0 AC117409.1-201ENST00000470499 1310 ntBASIC5.08□□□□□ -1.6
CROCCP3Q8IVE0 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.08□□□□□ -1.6
CROCCP3Q8IVE0 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CROCCP3Q8IVE0 AL121886.1-201ENST00000358609 435 ntBASIC5.08□□□□□ -1.6
CROCCP3Q8IVE0 RNU6-1251P-201ENST00000364502 107 ntBASIC5.08□□□□□ -1.6
CROCCP3Q8IVE0 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
CROCCP3Q8IVE0 AC005042.1-201ENST00000393397 800 ntBASIC5.08□□□□□ -1.6
CROCCP3Q8IVE0 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.08□□□□□ -1.6
CROCCP3Q8IVE0 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC5.08□□□□□ -1.6
CROCCP3Q8IVE0 RPL35AP31-201ENST00000418340 337 ntBASIC5.08□□□□□ -1.6
CROCCP3Q8IVE0 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.08□□□□□ -1.6
CROCCP3Q8IVE0 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.08□□□□□ -1.6
CROCCP3Q8IVE0 GPN3P1-201ENST00000423883 535 ntBASIC5.08□□□□□ -1.6
CROCCP3Q8IVE0 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC5.08□□□□□ -1.6
CROCCP3Q8IVE0 RBMY2JP-201ENST00000425544 1059 ntBASIC5.08□□□□□ -1.6
CROCCP3Q8IVE0 RPL19P16-201ENST00000433839 588 ntBASIC5.08□□□□□ -1.6
CROCCP3Q8IVE0 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.08□□□□□ -1.6
CROCCP3Q8IVE0 AC015983.1-201ENST00000441577 373 ntBASIC5.08□□□□□ -1.6
CROCCP3Q8IVE0 TRIM60P16-201ENST00000444048 694 ntBASIC5.08□□□□□ -1.6
CROCCP3Q8IVE0 OR2L9P-201ENST00000444456 913 ntBASIC5.08□□□□□ -1.6
CROCCP3Q8IVE0 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.08□□□□□ -1.6
CROCCP3Q8IVE0 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 149.8 ms