Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.38□□□□□ -1.39
GABPAQ06546 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.38□□□□□ -1.39
GABPAQ06546 AC016252.1-201ENST00000609721 474 ntBASIC6.38□□□□□ -1.39
GABPAQ06546 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.38□□□□□ -1.39
GABPAQ06546 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.38□□□□□ -1.39
GABPAQ06546 AC037198.3-201ENST00000616754 526 ntBASIC6.38□□□□□ -1.39
GABPAQ06546 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.38□□□□□ -1.39
GABPAQ06546 CYP4F35P-202ENST00000636121 390 ntBASIC6.38□□□□□ -1.39
GABPAQ06546 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
GABPAQ06546 AC079776.5-201ENST00000641920 211 ntBASIC6.38□□□□□ -1.39
GABPAQ06546 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
GABPAQ06546 AC034229.2-201ENST00000566945 2508 ntBASIC6.38□□□□□ -1.39
GABPAQ06546 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
GABPAQ06546 AL034549.2-201ENST00000618285 3373 ntBASIC6.38□□□□□ -1.39
GABPAQ06546 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
GABPAQ06546 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.38□□□□□ -1.39
GABPAQ06546 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
GABPAQ06546 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
GABPAQ06546 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
GABPAQ06546 AC006600.2-201ENST00000624834 2506 ntBASIC6.37□□□□□ -1.39
GABPAQ06546 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
GABPAQ06546 AC073365.1-203ENST00000641055 1992 ntBASIC6.37□□□□□ -1.39
GABPAQ06546 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
GABPAQ06546 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
GABPAQ06546 MRRFP1-201ENST00000435941 1675 ntBASIC6.37□□□□□ -1.39
GABPAQ06546 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
GABPAQ06546 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
GABPAQ06546 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.37□□□□□ -1.39
GABPAQ06546 RPL23P2-201ENST00000320371 421 ntBASIC6.37□□□□□ -1.39
GABPAQ06546 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
GABPAQ06546 DUTP5-201ENST00000406790 469 ntBASIC6.37□□□□□ -1.39
GABPAQ06546 RPS21P8-201ENST00000413365 247 ntBASIC6.37□□□□□ -1.39
GABPAQ06546 AC016769.2-201ENST00000414815 475 ntBASIC6.37□□□□□ -1.39
GABPAQ06546 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
GABPAQ06546 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.37□□□□□ -1.39
GABPAQ06546 LINC02210-201ENST00000444561 288 ntBASIC6.37□□□□□ -1.39
GABPAQ06546 IGBP1P3-201ENST00000447449 1000 ntBASIC6.37□□□□□ -1.39
GABPAQ06546 AC115223.1-201ENST00000466377 870 ntBASIC6.37□□□□□ -1.39
GABPAQ06546 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.37□□□□□ -1.39
GABPAQ06546 RN7SKP67-201ENST00000515905 235 ntBASIC6.37□□□□□ -1.39
GABPAQ06546 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
GABPAQ06546 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.37□□□□□ -1.39
GABPAQ06546 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.37□□□□□ -1.39
GABPAQ06546 AP001267.4-201ENST00000602598 545 ntBASIC6.37□□□□□ -1.39
GABPAQ06546 AC119501.1-201ENST00000603646 475 ntBASIC6.37□□□□□ -1.39
GABPAQ06546 AC092944.2-201ENST00000605443 889 ntBASIC6.37□□□□□ -1.39
GABPAQ06546 AC015712.7-201ENST00000615211 635 ntBASIC6.37□□□□□ -1.39
GABPAQ06546 AP002505.2-201ENST00000623585 696 ntBASIC6.37□□□□□ -1.39
GABPAQ06546 AC073869.8-201ENST00000641806 335 ntBASIC6.37□□□□□ -1.39
GABPAQ06546 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
GABPAQ06546 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
GABPAQ06546 AC232271.1-201ENST00000602455 2715 ntBASIC6.37□□□□□ -1.39
GABPAQ06546 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
GABPAQ06546 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.37□□□□□ -1.39
GABPAQ06546 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
GABPAQ06546 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
GABPAQ06546 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
GABPAQ06546 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.37□□□□□ -1.39
GABPAQ06546 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
GABPAQ06546 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
GABPAQ06546 AL359955.1-201ENST00000455242 3275 ntBASIC6.36□□□□□ -1.39
GABPAQ06546 AL353796.1-201ENST00000561542 3241 ntBASIC6.36□□□□□ -1.39
GABPAQ06546 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
GABPAQ06546 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
GABPAQ06546 RNA5SP507-201ENST00000363603 121 ntBASIC6.36□□□□□ -1.39
GABPAQ06546 RNU1-146P-201ENST00000364015 165 ntBASIC6.36□□□□□ -1.39
GABPAQ06546 RNU1-43P-201ENST00000365052 165 ntBASIC6.36□□□□□ -1.39
GABPAQ06546 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.36□□□□□ -1.39
GABPAQ06546 NPM1P22-201ENST00000427761 952 ntBASIC6.36□□□□□ -1.39
GABPAQ06546 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.36□□□□□ -1.39
GABPAQ06546 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.36□□□□□ -1.39
GABPAQ06546 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.36□□□□□ -1.39
GABPAQ06546 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.36□□□□□ -1.39
GABPAQ06546 RN7SL329P-201ENST00000467740 299 ntBASIC6.36□□□□□ -1.39
GABPAQ06546 RN7SL188P-201ENST00000469842 285 ntBASIC6.36□□□□□ -1.39
GABPAQ06546 AC004453.1-201ENST00000487895 408 ntBASIC6.36□□□□□ -1.39
GABPAQ06546 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC6.36□□□□□ -1.39
GABPAQ06546 RPL15P21-201ENST00000495592 567 ntBASIC6.36□□□□□ -1.39
GABPAQ06546 NDUFA5P12-201ENST00000503796 343 ntBASIC6.36□□□□□ -1.39
GABPAQ06546 AC091912.1-201ENST00000511351 248 ntBASIC6.36□□□□□ -1.39
GABPAQ06546 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.36□□□□□ -1.39
GABPAQ06546 AC022832.1-201ENST00000530718 645 ntBASIC6.36□□□□□ -1.39
GABPAQ06546 YWHABP2-201ENST00000540201 713 ntBASIC6.36□□□□□ -1.39
GABPAQ06546 HMGN2P6-201ENST00000551091 273 ntBASIC6.36□□□□□ -1.39
GABPAQ06546 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.36□□□□□ -1.39
GABPAQ06546 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.36□□□□□ -1.39
GABPAQ06546 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.36□□□□□ -1.39
GABPAQ06546 AC005341.1-201ENST00000571086 708 ntBASIC6.36□□□□□ -1.39
GABPAQ06546 AC007342.5-201ENST00000571340 2142 ntBASIC6.36□□□□□ -1.39
GABPAQ06546 AL353729.2-201ENST00000605859 1249 ntBASIC6.36□□□□□ -1.39
GABPAQ06546 AC118658.2-201ENST00000618697 459 ntBASIC6.36□□□□□ -1.39
GABPAQ06546 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.36□□□□□ -1.39
GABPAQ06546 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.36□□□□□ -1.39
GABPAQ06546 AL078621.3-201ENST00000623707 2042 ntBASIC6.36□□□□□ -1.39
GABPAQ06546 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
GABPAQ06546 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
GABPAQ06546 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
GABPAQ06546 AP000641.1-201ENST00000531988 1639 ntBASIC6.36□□□□□ -1.39
GABPAQ06546 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
GABPAQ06546 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms