Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.21□□□□□ -1.58
EFNA3P52797 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
EFNA3P52797 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.21□□□□□ -1.58
EFNA3P52797 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.21□□□□□ -1.58
EFNA3P52797 AC000068.2-201ENST00000608816 460 ntBASIC5.21□□□□□ -1.58
EFNA3P52797 MIR8080-201ENST00000622224 89 ntBASIC5.21□□□□□ -1.58
EFNA3P52797 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.21□□□□□ -1.58
EFNA3P52797 AC136428.4-201ENST00000634254 1155 ntBASIC5.21□□□□□ -1.58
EFNA3P52797 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
EFNA3P52797 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
EFNA3P52797 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
EFNA3P52797 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
EFNA3P52797 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.21□□□□□ -1.58
EFNA3P52797 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
EFNA3P52797 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
EFNA3P52797 AC006206.1-201ENST00000544842 3387 ntBASIC5.21□□□□□ -1.58
EFNA3P52797 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
EFNA3P52797 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
EFNA3P52797 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
EFNA3P52797 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
EFNA3P52797 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.2□□□□□ -1.58
EFNA3P52797 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
EFNA3P52797 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
EFNA3P52797 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.2□□□□□ -1.58
EFNA3P52797 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.2□□□□□ -1.58
EFNA3P52797 MIR1178-201ENST00000408396 91 ntBASIC5.2□□□□□ -1.58
EFNA3P52797 SNORA81-201ENST00000408493 178 ntBASIC5.2□□□□□ -1.58
EFNA3P52797 RN7SKP59-201ENST00000410520 314 ntBASIC5.2□□□□□ -1.58
EFNA3P52797 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
EFNA3P52797 BMS1P13-201ENST00000417301 885 ntBASIC5.2□□□□□ -1.58
EFNA3P52797 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
EFNA3P52797 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.2□□□□□ -1.58
EFNA3P52797 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.2□□□□□ -1.58
EFNA3P52797 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
EFNA3P52797 AL035090.1-201ENST00000454835 332 ntBASIC5.2□□□□□ -1.58
EFNA3P52797 AL133445.1-201ENST00000467051 452 ntBASIC5.2□□□□□ -1.58
EFNA3P52797 PDCL3P4-201ENST00000489621 720 ntBASIC5.2□□□□□ -1.58
EFNA3P52797 ST13P12-201ENST00000508958 1094 ntBASIC5.2□□□□□ -1.58
EFNA3P52797 SNORA70.11-201ENST00000515987 138 ntBASIC5.2□□□□□ -1.58
EFNA3P52797 SNORA70.13-201ENST00000516116 138 ntBASIC5.2□□□□□ -1.58
EFNA3P52797 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.2□□□□□ -1.58
EFNA3P52797 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.2□□□□□ -1.58
EFNA3P52797 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.2□□□□□ -1.58
EFNA3P52797 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.2□□□□□ -1.58
EFNA3P52797 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.2□□□□□ -1.58
EFNA3P52797 FKBP1AP1-201ENST00000594588 318 ntBASIC5.2□□□□□ -1.58
EFNA3P52797 NANOGP3-201ENST00000605855 286 ntBASIC5.2□□□□□ -1.58
EFNA3P52797 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.2□□□□□ -1.58
EFNA3P52797 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.2□□□□□ -1.58
EFNA3P52797 AC005840.5-201ENST00000619166 599 ntBASIC5.2□□□□□ -1.58
EFNA3P52797 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.2□□□□□ -1.58
EFNA3P52797 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
EFNA3P52797 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
EFNA3P52797 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
EFNA3P52797 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.2□□□□□ -1.58
EFNA3P52797 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
EFNA3P52797 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.2□□□□□ -1.58
EFNA3P52797 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
EFNA3P52797 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
EFNA3P52797 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
EFNA3P52797 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
EFNA3P52797 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.2□□□□□ -1.58
EFNA3P52797 AC010266.2-201ENST00000564741 3255 ntBASIC5.2□□□□□ -1.58
EFNA3P52797 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.2□□□□□ -1.58
EFNA3P52797 BCORP1-203ENST00000513194 5093 ntBASIC5.2□□□□□ -1.58
EFNA3P52797 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
EFNA3P52797 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.19□□□□□ -1.58
EFNA3P52797 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
EFNA3P52797 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
EFNA3P52797 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
EFNA3P52797 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.19□□□□□ -1.58
EFNA3P52797 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
EFNA3P52797 AL022311.1-201ENST00000623726 19416 ntBASIC5.19□□□□□ -1.58
EFNA3P52797 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.19□□□□□ -1.58
EFNA3P52797 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
EFNA3P52797 CASC19-248ENST00000641674 1356 ntBASIC5.19□□□□□ -1.58
EFNA3P52797 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
EFNA3P52797 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
EFNA3P52797 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.19□□□□□ -1.58
EFNA3P52797 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
EFNA3P52797 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.19□□□□□ -1.58
EFNA3P52797 RNA5SP183-201ENST00000362452 119 ntBASIC5.19□□□□□ -1.58
EFNA3P52797 U3.10-201ENST00000364459 214 ntBASIC5.19□□□□□ -1.58
EFNA3P52797 RNU1-77P-201ENST00000390868 162 ntBASIC5.19□□□□□ -1.58
EFNA3P52797 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.19□□□□□ -1.58
EFNA3P52797 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.19□□□□□ -1.58
EFNA3P52797 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.19□□□□□ -1.58
EFNA3P52797 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.19□□□□□ -1.58
EFNA3P52797 AC021876.1-201ENST00000425959 359 ntBASIC5.19□□□□□ -1.58
EFNA3P52797 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.19□□□□□ -1.58
EFNA3P52797 CYCSP12-201ENST00000437729 300 ntBASIC5.19□□□□□ -1.58
EFNA3P52797 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.19□□□□□ -1.58
EFNA3P52797 NANOGP9-201ENST00000439890 892 ntBASIC5.19□□□□□ -1.58
EFNA3P52797 RPS17P5-201ENST00000498293 408 ntBASIC5.19□□□□□ -1.58
EFNA3P52797 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.19□□□□□ -1.58
EFNA3P52797 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.19□□□□□ -1.58
EFNA3P52797 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.19□□□□□ -1.58
EFNA3P52797 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.19□□□□□ -1.58
EFNA3P52797 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.19□□□□□ -1.58
EFNA3P52797 AC060780.2-201ENST00000589047 198 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms