Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
CLCNKAP51800 OR1F12-201ENST00000402365 945 ntBASIC5.66□□□□□ -1.5
CLCNKAP51800 HMGB1P20-201ENST00000402555 677 ntBASIC5.66□□□□□ -1.5
CLCNKAP51800 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.66□□□□□ -1.5
CLCNKAP51800 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.66□□□□□ -1.5
CLCNKAP51800 CR848007.2-201ENST00000424918 787 ntBASIC5.66□□□□□ -1.5
CLCNKAP51800 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CLCNKAP51800 MTCO1P57-201ENST00000432182 261 ntBASIC5.66□□□□□ -1.5
CLCNKAP51800 HMGB3P24-201ENST00000433260 622 ntBASIC5.66□□□□□ -1.5
CLCNKAP51800 ZFAND6P1-201ENST00000434138 605 ntBASIC5.66□□□□□ -1.5
CLCNKAP51800 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.66□□□□□ -1.5
CLCNKAP51800 AC002504.1-201ENST00000438281 691 ntBASIC5.66□□□□□ -1.5
CLCNKAP51800 AC004129.2-201ENST00000457229 287 ntBASIC5.66□□□□□ -1.5
CLCNKAP51800 RPS23P6-201ENST00000466136 431 ntBASIC5.66□□□□□ -1.5
CLCNKAP51800 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.66□□□□□ -1.5
CLCNKAP51800 AC006539.1-201ENST00000481419 501 ntBASIC5.66□□□□□ -1.5
CLCNKAP51800 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.66□□□□□ -1.5
CLCNKAP51800 AC009120.1-201ENST00000493458 473 ntBASIC5.66□□□□□ -1.5
CLCNKAP51800 RN7SL101P-201ENST00000496350 279 ntBASIC5.66□□□□□ -1.5
CLCNKAP51800 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.66□□□□□ -1.5
CLCNKAP51800 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.66□□□□□ -1.5
CLCNKAP51800 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.66□□□□□ -1.5
CLCNKAP51800 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.66□□□□□ -1.5
CLCNKAP51800 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.66□□□□□ -1.5
CLCNKAP51800 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.66□□□□□ -1.5
CLCNKAP51800 AC096996.1-201ENST00000563813 325 ntBASIC5.66□□□□□ -1.5
CLCNKAP51800 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
CLCNKAP51800 AC020978.7-201ENST00000575953 1187 ntBASIC5.66□□□□□ -1.5
CLCNKAP51800 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.66□□□□□ -1.5
CLCNKAP51800 NANOGP3-201ENST00000605855 286 ntBASIC5.66□□□□□ -1.5
CLCNKAP51800 OR7M1P-201ENST00000608946 533 ntBASIC5.66□□□□□ -1.5
CLCNKAP51800 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.66□□□□□ -1.5
CLCNKAP51800 AL162233.1-201ENST00000620014 944 ntBASIC5.66□□□□□ -1.5
CLCNKAP51800 AC015660.5-201ENST00000623238 564 ntBASIC5.66□□□□□ -1.5
CLCNKAP51800 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.66□□□□□ -1.5
CLCNKAP51800 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
CLCNKAP51800 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLCNKAP51800 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.66□□□□□ -1.5
CLCNKAP51800 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CLCNKAP51800 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
CLCNKAP51800 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.66□□□□□ -1.5
CLCNKAP51800 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.66□□□□□ -1.5
CLCNKAP51800 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.66□□□□□ -1.5
CLCNKAP51800 MTND4P21-201ENST00000453886 1357 ntBASIC5.66□□□□□ -1.5
CLCNKAP51800 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLCNKAP51800 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLCNKAP51800 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLCNKAP51800 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
CLCNKAP51800 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CLCNKAP51800 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
CLCNKAP51800 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.65□□□□□ -1.5
CLCNKAP51800 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.65□□□□□ -1.5
CLCNKAP51800 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.65□□□□□ -1.5
CLCNKAP51800 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CLCNKAP51800 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.65□□□□□ -1.5
CLCNKAP51800 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
CLCNKAP51800 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.65□□□□□ -1.5
CLCNKAP51800 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLCNKAP51800 SNORA64.1-201ENST00000362600 132 ntBASIC5.65□□□□□ -1.5
CLCNKAP51800 Y_RNA.110-201ENST00000363220 99 ntBASIC5.65□□□□□ -1.5
CLCNKAP51800 MIR143-201ENST00000385300 106 ntBASIC5.65□□□□□ -1.5
CLCNKAP51800 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.65□□□□□ -1.5
CLCNKAP51800 AL139039.2-201ENST00000407436 479 ntBASIC5.65□□□□□ -1.5
CLCNKAP51800 RN7SKP286-201ENST00000410894 299 ntBASIC5.65□□□□□ -1.5
CLCNKAP51800 CHEK2P5-201ENST00000423877 246 ntBASIC5.65□□□□□ -1.5
CLCNKAP51800 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC5.65□□□□□ -1.5
CLCNKAP51800 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.65□□□□□ -1.5
CLCNKAP51800 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.65□□□□□ -1.5
CLCNKAP51800 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.65□□□□□ -1.5
CLCNKAP51800 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.65□□□□□ -1.5
CLCNKAP51800 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
CLCNKAP51800 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.65□□□□□ -1.5
CLCNKAP51800 RPL32P33-201ENST00000487023 394 ntBASIC5.65□□□□□ -1.5
CLCNKAP51800 OR7E157P-201ENST00000494376 911 ntBASIC5.65□□□□□ -1.5
CLCNKAP51800 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.65□□□□□ -1.5
CLCNKAP51800 RNU6-615P-201ENST00000516065 106 ntBASIC5.65□□□□□ -1.5
CLCNKAP51800 snoU109.5-201ENST00000516231 132 ntBASIC5.65□□□□□ -1.5
CLCNKAP51800 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.65□□□□□ -1.5
CLCNKAP51800 AC139365.2-201ENST00000517972 253 ntBASIC5.65□□□□□ -1.5
CLCNKAP51800 AC112191.2-201ENST00000522428 333 ntBASIC5.65□□□□□ -1.5
CLCNKAP51800 HMGB1P42-201ENST00000532126 553 ntBASIC5.65□□□□□ -1.5
CLCNKAP51800 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLCNKAP51800 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.65□□□□□ -1.5
CLCNKAP51800 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CLCNKAP51800 MTND2P17-201ENST00000550281 688 ntBASIC5.65□□□□□ -1.5
CLCNKAP51800 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.65□□□□□ -1.5
CLCNKAP51800 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.65□□□□□ -1.5
CLCNKAP51800 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.65□□□□□ -1.5
CLCNKAP51800 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.65□□□□□ -1.5
CLCNKAP51800 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.65□□□□□ -1.5
CLCNKAP51800 AC063977.5-201ENST00000601044 974 ntBASIC5.65□□□□□ -1.5
CLCNKAP51800 AL356752.1-201ENST00000615844 593 ntBASIC5.65□□□□□ -1.5
CLCNKAP51800 AL138960.2-201ENST00000625145 535 ntBASIC5.65□□□□□ -1.5
CLCNKAP51800 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.5
CLCNKAP51800 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.65□□□□□ -1.51
CLCNKAP51800 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.65□□□□□ -1.51
CLCNKAP51800 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
CLCNKAP51800 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
CLCNKAP51800 AC245100.2-201ENST00000454544 1679 ntBASIC5.65□□□□□ -1.51
CLCNKAP51800 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms