Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
HOXC8P31273 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC8P31273 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.1□□□□□ -1.43
HOXC8P31273 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HOXC8P31273 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.09□□□□□ -1.43
HOXC8P31273 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
HOXC8P31273 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
HOXC8P31273 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
HOXC8P31273 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.09□□□□□ -1.43
HOXC8P31273 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
HOXC8P31273 AC022164.1-201ENST00000568767 2673 ntBASIC6.09□□□□□ -1.43
HOXC8P31273 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HOXC8P31273 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HOXC8P31273 RNU1-136P-201ENST00000384181 164 ntBASIC6.09□□□□□ -1.43
HOXC8P31273 RNU1-106P-201ENST00000384382 164 ntBASIC6.09□□□□□ -1.43
HOXC8P31273 AL356968.2-201ENST00000412769 1257 ntBASIC6.09□□□□□ -1.43
HOXC8P31273 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.09□□□□□ -1.43
HOXC8P31273 PPP2R2DP1-201ENST00000420526 637 ntBASIC6.09□□□□□ -1.43
HOXC8P31273 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HOXC8P31273 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXC8P31273 PSMD10P3-201ENST00000437000 448 ntBASIC6.09□□□□□ -1.43
HOXC8P31273 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.09□□□□□ -1.43
HOXC8P31273 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.09□□□□□ -1.43
HOXC8P31273 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC6.09□□□□□ -1.43
HOXC8P31273 CBX1P5-201ENST00000475330 559 ntBASIC6.09□□□□□ -1.43
HOXC8P31273 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXC8P31273 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXC8P31273 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.09□□□□□ -1.43
HOXC8P31273 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXC8P31273 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXC8P31273 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.09□□□□□ -1.43
HOXC8P31273 RBM22P1-201ENST00000578589 1214 ntBASIC6.09□□□□□ -1.43
HOXC8P31273 AL133481.2-203ENST00000607558 139 ntBASIC6.09□□□□□ -1.43
HOXC8P31273 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HOXC8P31273 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.09□□□□□ -1.43
HOXC8P31273 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HOXC8P31273 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
HOXC8P31273 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HOXC8P31273 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
HOXC8P31273 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.09□□□□□ -1.44
HOXC8P31273 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
HOXC8P31273 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC8P31273 AC073429.2-201ENST00000569694 1444 ntBASIC6.08□□□□□ -1.44
HOXC8P31273 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC8P31273 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
HOXC8P31273 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC8P31273 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.08□□□□□ -1.44
HOXC8P31273 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.08□□□□□ -1.44
HOXC8P31273 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC8P31273 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC8P31273 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC8P31273 RN7SKP125-201ENST00000410481 302 ntBASIC6.08□□□□□ -1.44
HOXC8P31273 RN7SKP213-201ENST00000410746 298 ntBASIC6.08□□□□□ -1.44
HOXC8P31273 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXC8P31273 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC8P31273 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.08□□□□□ -1.44
HOXC8P31273 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXC8P31273 RPS27P18-201ENST00000431701 247 ntBASIC6.08□□□□□ -1.44
HOXC8P31273 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
HOXC8P31273 AURKAPS1-201ENST00000451805 1212 ntBASIC6.08□□□□□ -1.44
HOXC8P31273 AL389915.2-201ENST00000454576 441 ntBASIC6.08□□□□□ -1.44
HOXC8P31273 RPL7AP6-201ENST00000477943 801 ntBASIC6.08□□□□□ -1.44
HOXC8P31273 RPSAP50-201ENST00000481955 852 ntBASIC6.08□□□□□ -1.44
HOXC8P31273 SNRPCP2-201ENST00000504370 475 ntBASIC6.08□□□□□ -1.44
HOXC8P31273 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC8P31273 HMGB1P44-201ENST00000508597 572 ntBASIC6.08□□□□□ -1.44
HOXC8P31273 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC6.08□□□□□ -1.44
HOXC8P31273 CCNHP1-201ENST00000513311 678 ntBASIC6.08□□□□□ -1.44
HOXC8P31273 PMS2P3-207ENST00000529061 717 ntBASIC6.08□□□□□ -1.44
HOXC8P31273 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.08□□□□□ -1.44
HOXC8P31273 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.08□□□□□ -1.44
HOXC8P31273 NMNAT1P5-201ENST00000559657 841 ntBASIC6.08□□□□□ -1.44
HOXC8P31273 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXC8P31273 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC8P31273 AP000919.1-201ENST00000582850 985 ntBASIC6.08□□□□□ -1.44
HOXC8P31273 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC8P31273 RNU6-84P-201ENST00000607737 102 ntBASIC6.08□□□□□ -1.44
HOXC8P31273 AC107905.1-201ENST00000616204 426 ntBASIC6.08□□□□□ -1.44
HOXC8P31273 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXC8P31273 AC002044.3-201ENST00000623314 541 ntBASIC6.08□□□□□ -1.44
HOXC8P31273 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXC8P31273 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC8P31273 MT-RNR2-201ENST00000387347 1559 ntBASIC6.08□□□□□ -1.44
HOXC8P31273 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
HOXC8P31273 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXC8P31273 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC8P31273 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXC8P31273 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXC8P31273 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC8P31273 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXC8P31273 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC8P31273 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
HOXC8P31273 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC8P31273 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC8P31273 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC8P31273 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.07□□□□□ -1.44
HOXC8P31273 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.07□□□□□ -1.44
HOXC8P31273 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC8P31273 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.07□□□□□ -1.44
HOXC8P31273 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms