Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.74□□□□□ -1.33
COL8A1P27658 FANCL-202ENST00000402135 1698 ntAPPRIS ALT1 TSL 2 BASIC6.74□□□□□ -1.33
COL8A1P27658 AC000099.1-202ENST00000413812 1912 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL8A1P27658 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC6.74□□□□□ -1.33
COL8A1P27658 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL8A1P27658 CELF1-215ENST00000532048 3044 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL8A1P27658 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC6.74□□□□□ -1.33
COL8A1P27658 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC6.74□□□□□ -1.33
COL8A1P27658 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
COL8A1P27658 ZNF544-201ENST00000269829 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL8A1P27658 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC6.73□□□□□ -1.33
COL8A1P27658 NUMA1-232ENST00000613205 3940 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
COL8A1P27658 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC6.73□□□□□ -1.33
COL8A1P27658 GTPBP10-202ENST00000257659 1740 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL8A1P27658 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL8A1P27658 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.73□□□□□ -1.33
COL8A1P27658 AL080317.3-201ENST00000607434 4315 ntBASIC6.73□□□□□ -1.33
COL8A1P27658 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL8A1P27658 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
COL8A1P27658 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL8A1P27658 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC6.73□□□□□ -1.33
COL8A1P27658 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC6.73□□□□□ -1.33
COL8A1P27658 OR2T10-202ENST00000642090 3519 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
COL8A1P27658 PAICS-202ENST00000399688 3297 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL8A1P27658 ITIH3-211ENST00000621946 3038 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL8A1P27658 CPA4-201ENST00000222482 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL8A1P27658 RPL21P132-201ENST00000331267 462 ntBASIC6.73□□□□□ -1.33
COL8A1P27658 Y_RNA.157-201ENST00000363638 102 ntBASIC6.73□□□□□ -1.33
COL8A1P27658 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
COL8A1P27658 PSMA6P1-201ENST00000400275 741 ntBASIC6.73□□□□□ -1.33
COL8A1P27658 AL603766.1-201ENST00000407763 664 ntBASIC6.73□□□□□ -1.33
COL8A1P27658 RN7SKP139-201ENST00000410411 293 ntBASIC6.73□□□□□ -1.33
COL8A1P27658 Y_RNA.598-201ENST00000410480 95 ntBASIC6.73□□□□□ -1.33
COL8A1P27658 AL139128.1-201ENST00000413921 941 ntBASIC6.73□□□□□ -1.33
COL8A1P27658 AC245054.2-201ENST00000415639 319 ntBASIC6.73□□□□□ -1.33
COL8A1P27658 B3GALNT1P1-201ENST00000420569 975 ntBASIC6.73□□□□□ -1.33
COL8A1P27658 RPL5P34-201ENST00000426545 891 ntBASIC6.73□□□□□ -1.33
COL8A1P27658 AC073900.1-201ENST00000429766 776 ntBASIC6.73□□□□□ -1.33
COL8A1P27658 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC6.73□□□□□ -1.33
COL8A1P27658 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC6.73□□□□□ -1.33
COL8A1P27658 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC6.73□□□□□ -1.33
COL8A1P27658 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC6.73□□□□□ -1.33
COL8A1P27658 RABEPKP1-201ENST00000440529 1026 ntBASIC6.73□□□□□ -1.33
COL8A1P27658 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC6.73□□□□□ -1.33
COL8A1P27658 RGS5-217ENST00000451759 835 ntTSL 3 BASIC6.73□□□□□ -1.33
COL8A1P27658 RPS24P6-201ENST00000452670 400 ntBASIC6.73□□□□□ -1.33
COL8A1P27658 AC016724.1-201ENST00000453215 421 ntBASIC6.73□□□□□ -1.33
COL8A1P27658 CACYBPP2-201ENST00000453625 678 ntBASIC6.73□□□□□ -1.33
COL8A1P27658 MRPS21P1-201ENST00000453850 223 ntBASIC6.73□□□□□ -1.33
COL8A1P27658 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.73□□□□□ -1.33
COL8A1P27658 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC6.73□□□□□ -1.33
COL8A1P27658 OR7E163P-201ENST00000505943 894 ntBASIC6.73□□□□□ -1.33
COL8A1P27658 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC6.73□□□□□ -1.33
COL8A1P27658 AC034159.1-201ENST00000513885 583 ntBASIC6.73□□□□□ -1.33
COL8A1P27658 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC6.73□□□□□ -1.33
COL8A1P27658 IGKV3-34-201ENST00000521692 293 ntBASIC6.73□□□□□ -1.33
COL8A1P27658 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC6.73□□□□□ -1.33
COL8A1P27658 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC6.73□□□□□ -1.33
COL8A1P27658 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC6.73□□□□□ -1.33
COL8A1P27658 AC092747.2-201ENST00000545069 983 ntBASIC6.73□□□□□ -1.33
COL8A1P27658 MT1B-202ENST00000562399 351 ntTSL 3 BASIC6.73□□□□□ -1.33
COL8A1P27658 AC090826.1-203ENST00000569235 490 ntBASIC6.73□□□□□ -1.33
COL8A1P27658 AC061975.3-201ENST00000583209 244 ntBASIC6.73□□□□□ -1.33
COL8A1P27658 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC6.73□□□□□ -1.33
COL8A1P27658 RNU6-88P-201ENST00000606801 100 ntBASIC6.73□□□□□ -1.33
COL8A1P27658 RN7SL778P-201ENST00000607160 297 ntBASIC6.73□□□□□ -1.33
COL8A1P27658 AC090948.1-201ENST00000607464 549 ntBASIC6.73□□□□□ -1.33
COL8A1P27658 AC107214.2-201ENST00000608204 634 ntBASIC6.73□□□□□ -1.33
COL8A1P27658 RMST_3.1-201ENST00000611651 109 ntBASIC6.73□□□□□ -1.33
COL8A1P27658 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
COL8A1P27658 AC091953.4-201ENST00000625179 341 ntBASIC6.73□□□□□ -1.33
COL8A1P27658 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
COL8A1P27658 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL8A1P27658 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL8A1P27658 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL8A1P27658 KIF23-201ENST00000260363 3713 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL8A1P27658 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC6.73□□□□□ -1.33
COL8A1P27658 GOLGA8B-202ENST00000438958 4252 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
COL8A1P27658 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC6.73□□□□□ -1.33
COL8A1P27658 TP63-203ENST00000354600 4668 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL8A1P27658 RAD21L1-203ENST00000409241 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL8A1P27658 SNTG1-207ENST00000522124 3504 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL8A1P27658 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL8A1P27658 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC6.73□□□□□ -1.33
COL8A1P27658 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL8A1P27658 AC124045.1-201ENST00000606008 1953 ntBASIC6.73□□□□□ -1.33
COL8A1P27658 DCAF13P3-201ENST00000561147 1334 ntBASIC6.73□□□□□ -1.33
COL8A1P27658 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL8A1P27658 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL8A1P27658 GBAP1-202ENST00000459805 2922 ntTSL 5 BASIC6.73□□□□□ -1.33
COL8A1P27658 ABCF2P1-201ENST00000465687 1867 ntBASIC6.73□□□□□ -1.33
COL8A1P27658 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL8A1P27658 AL590999.1-201ENST00000607675 3776 ntTSL 2 BASIC6.72□□□□□ -1.33
COL8A1P27658 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.72□□□□□ -1.33
COL8A1P27658 ASAP1-IT2-201ENST00000626977 2031 ntBASIC6.72□□□□□ -1.33
COL8A1P27658 CACNB2-201ENST00000282343 3524 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL8A1P27658 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL8A1P27658 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL8A1P27658 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.72□□□□□ -1.33
COL8A1P27658 ERGIC1-201ENST00000326654 3952 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms