Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC7.51□□□□□ -1.21
LIG1P18858 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC7.51□□□□□ -1.21
LIG1P18858 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
LIG1P18858 AC067904.2-201ENST00000517322 1283 ntBASIC7.51□□□□□ -1.21
LIG1P18858 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC7.51□□□□□ -1.21
LIG1P18858 ERP27-202ENST00000540097 993 ntTSL 2 BASIC7.51□□□□□ -1.21
LIG1P18858 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
LIG1P18858 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC7.51□□□□□ -1.21
LIG1P18858 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC7.51□□□□□ -1.21
LIG1P18858 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC7.51□□□□□ -1.21
LIG1P18858 AC095057.3-201ENST00000567102 1157 ntBASIC7.51□□□□□ -1.21
LIG1P18858 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC7.51□□□□□ -1.21
LIG1P18858 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC7.51□□□□□ -1.21
LIG1P18858 RBM22P1-201ENST00000578589 1214 ntBASIC7.51□□□□□ -1.21
LIG1P18858 RN7SL66P-201ENST00000582099 264 ntBASIC7.51□□□□□ -1.21
LIG1P18858 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC7.51□□□□□ -1.21
LIG1P18858 BUB1P1-201ENST00000603541 607 ntBASIC7.51□□□□□ -1.21
LIG1P18858 AC093765.1-201ENST00000603758 881 ntBASIC7.51□□□□□ -1.21
LIG1P18858 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC7.51□□□□□ -1.21
LIG1P18858 AP000254.1-201ENST00000609934 520 ntBASIC7.51□□□□□ -1.21
LIG1P18858 AL121890.3-201ENST00000618494 516 ntBASIC7.51□□□□□ -1.21
LIG1P18858 AC005899.6-201ENST00000620729 297 ntBASIC7.51□□□□□ -1.21
LIG1P18858 AC006328.2-201ENST00000623198 397 ntBASIC7.51□□□□□ -1.21
LIG1P18858 AC079248.2-201ENST00000623779 326 ntBASIC7.51□□□□□ -1.21
LIG1P18858 AC012005.2-201ENST00000624333 397 ntBASIC7.51□□□□□ -1.21
LIG1P18858 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC7.51□□□□□ -1.21
LIG1P18858 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC7.51□□□□□ -1.21
LIG1P18858 OR8G3P-202ENST00000641572 1255 ntBASIC7.51□□□□□ -1.21
LIG1P18858 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
LIG1P18858 AL662795.2-201ENST00000624252 3706 ntBASIC7.51□□□□□ -1.21
LIG1P18858 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC7.51□□□□□ -1.21
LIG1P18858 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC7.5□□□□□ -1.21
LIG1P18858 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
LIG1P18858 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
LIG1P18858 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
LIG1P18858 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC7.5□□□□□ -1.21
LIG1P18858 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
LIG1P18858 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC7.5□□□□□ -1.21
LIG1P18858 DMD-205ENST00000359836 7339 ntTSL 5 BASIC7.5□□□□□ -1.21
LIG1P18858 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
LIG1P18858 METTL5-202ENST00000308099 629 ntTSL 3 BASIC7.5□□□□□ -1.21
LIG1P18858 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
LIG1P18858 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
LIG1P18858 RN7SKP191-201ENST00000364713 306 ntBASIC7.5□□□□□ -1.21
LIG1P18858 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
LIG1P18858 AL451142.1-201ENST00000375867 775 ntBASIC7.5□□□□□ -1.21
LIG1P18858 SNORA7A-201ENST00000384765 139 ntBASIC7.5□□□□□ -1.21
LIG1P18858 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
LIG1P18858 AP003170.5-201ENST00000397185 335 ntBASIC7.5□□□□□ -1.21
LIG1P18858 ARSFP1-201ENST00000398758 477 ntBASIC7.5□□□□□ -1.21
LIG1P18858 AL021407.1-201ENST00000404531 386 ntBASIC7.5□□□□□ -1.21
LIG1P18858 MIR1266-201ENST00000408125 84 ntBASIC7.5□□□□□ -1.21
LIG1P18858 RN7SKP296-201ENST00000411185 341 ntBASIC7.5□□□□□ -1.21
LIG1P18858 CDY17P-201ENST00000414121 1282 ntBASIC7.5□□□□□ -1.21
LIG1P18858 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC7.5□□□□□ -1.21
LIG1P18858 RPL30P16-201ENST00000419341 429 ntBASIC7.5□□□□□ -1.21
LIG1P18858 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC7.5□□□□□ -1.21
LIG1P18858 AC007568.1-201ENST00000422912 471 ntBASIC7.5□□□□□ -1.21
LIG1P18858 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC7.5□□□□□ -1.21
LIG1P18858 CDY8P-201ENST00000428380 1279 ntBASIC7.5□□□□□ -1.21
LIG1P18858 BX119321.1-201ENST00000428912 797 ntBASIC7.5□□□□□ -1.21
LIG1P18858 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
LIG1P18858 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC7.5□□□□□ -1.21
LIG1P18858 MTND5P2-201ENST00000442927 1142 ntBASIC7.5□□□□□ -1.21
LIG1P18858 RPL34P26-201ENST00000445636 354 ntBASIC7.5□□□□□ -1.21
LIG1P18858 PFN1P11-201ENST00000445829 389 ntBASIC7.5□□□□□ -1.21
LIG1P18858 CDY20P-201ENST00000447528 1279 ntBASIC7.5□□□□□ -1.21
LIG1P18858 MRPL42P4-201ENST00000453267 443 ntBASIC7.5□□□□□ -1.21
LIG1P18858 NDUFAF4P4-201ENST00000454883 502 ntBASIC7.5□□□□□ -1.21
LIG1P18858 AC236972.4-201ENST00000458091 963 ntBASIC7.5□□□□□ -1.21
LIG1P18858 RNU7-125P-201ENST00000458760 62 ntBASIC7.5□□□□□ -1.21
LIG1P18858 RPS4XP6-201ENST00000477670 797 ntBASIC7.5□□□□□ -1.21
LIG1P18858 PFN1P8-201ENST00000497012 543 ntBASIC7.5□□□□□ -1.21
LIG1P18858 MTATP6P1-201ENST00000514057 681 ntBASIC7.5□□□□□ -1.21
LIG1P18858 AC093878.1-201ENST00000515630 432 ntBASIC7.5□□□□□ -1.21
LIG1P18858 AC060788.1-201ENST00000521318 469 ntBASIC7.5□□□□□ -1.21
LIG1P18858 KCTD9P6-201ENST00000522306 950 ntBASIC7.5□□□□□ -1.21
LIG1P18858 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
LIG1P18858 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC7.5□□□□□ -1.21
LIG1P18858 AC073916.1-201ENST00000545095 130 ntBASIC7.5□□□□□ -1.21
LIG1P18858 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
LIG1P18858 AC091304.4-201ENST00000565703 620 ntBASIC7.5□□□□□ -1.21
LIG1P18858 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC7.5□□□□□ -1.21
LIG1P18858 AP001981.2-201ENST00000603241 418 ntBASIC7.5□□□□□ -1.21
LIG1P18858 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC7.5□□□□□ -1.21
LIG1P18858 RPS4XP21-201ENST00000603814 750 ntBASIC7.5□□□□□ -1.21
LIG1P18858 MTND3P19-201ENST00000603825 345 ntBASIC7.5□□□□□ -1.21
LIG1P18858 IGKV2OR2-7-201ENST00000604652 304 ntBASIC7.5□□□□□ -1.21
LIG1P18858 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC7.5□□□□□ -1.21
LIG1P18858 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
LIG1P18858 AL137000.1-201ENST00000610528 1244 ntBASIC7.5□□□□□ -1.21
LIG1P18858 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
LIG1P18858 AC004241.2-201ENST00000614562 444 ntBASIC7.5□□□□□ -1.21
LIG1P18858 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
LIG1P18858 AC004836.1-201ENST00000623032 634 ntBASIC7.5□□□□□ -1.21
LIG1P18858 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
LIG1P18858 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
LIG1P18858 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
LIG1P18858 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
LIG1P18858 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms