Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC4.38□□□□□ -1.71
DEFA4P12838 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.38□□□□□ -1.71
DEFA4P12838 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.38□□□□□ -1.71
DEFA4P12838 RPL12P48-201ENST00000605620 304 ntBASIC4.38□□□□□ -1.71
DEFA4P12838 AC129915.3-201ENST00000634128 948 ntBASIC4.38□□□□□ -1.71
DEFA4P12838 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC4.38□□□□□ -1.71
DEFA4P12838 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
DEFA4P12838 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
DEFA4P12838 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
DEFA4P12838 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
DEFA4P12838 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
DEFA4P12838 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.38□□□□□ -1.71
DEFA4P12838 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
DEFA4P12838 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
DEFA4P12838 AC092376.2-201ENST00000622621 4116 ntBASIC4.38□□□□□ -1.71
DEFA4P12838 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
DEFA4P12838 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
DEFA4P12838 AC007842.1-201ENST00000597336 2039 ntBASIC4.38□□□□□ -1.71
DEFA4P12838 AL162456.1-201ENST00000634535 2006 ntBASIC4.38□□□□□ -1.71
DEFA4P12838 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
DEFA4P12838 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
DEFA4P12838 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.37□□□□□ -1.71
DEFA4P12838 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.37□□□□□ -1.71
DEFA4P12838 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.37□□□□□ -1.71
DEFA4P12838 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
DEFA4P12838 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
DEFA4P12838 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
DEFA4P12838 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
DEFA4P12838 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
DEFA4P12838 RNU4-2-201ENST00000365668 141 ntBASIC4.37□□□□□ -1.71
DEFA4P12838 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
DEFA4P12838 PKIB-203ENST00000368446 556 ntTSL 2 BASIC4.37□□□□□ -1.71
DEFA4P12838 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
DEFA4P12838 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.37□□□□□ -1.71
DEFA4P12838 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
DEFA4P12838 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.37□□□□□ -1.71
DEFA4P12838 RPL34P3-201ENST00000421454 338 ntBASIC4.37□□□□□ -1.71
DEFA4P12838 AC127526.2-201ENST00000426436 775 ntBASIC4.37□□□□□ -1.71
DEFA4P12838 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.37□□□□□ -1.71
DEFA4P12838 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.37□□□□□ -1.71
DEFA4P12838 AL136231.1-201ENST00000429407 730 ntBASIC4.37□□□□□ -1.71
DEFA4P12838 AC005297.1-201ENST00000444765 862 ntBASIC4.37□□□□□ -1.71
DEFA4P12838 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.37□□□□□ -1.71
DEFA4P12838 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.37□□□□□ -1.71
DEFA4P12838 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.37□□□□□ -1.71
DEFA4P12838 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.37□□□□□ -1.71
DEFA4P12838 MRPS16P1-201ENST00000523462 412 ntBASIC4.37□□□□□ -1.71
DEFA4P12838 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC4.37□□□□□ -1.71
DEFA4P12838 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC4.37□□□□□ -1.71
DEFA4P12838 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.37□□□□□ -1.71
DEFA4P12838 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC4.37□□□□□ -1.71
DEFA4P12838 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC4.37□□□□□ -1.71
DEFA4P12838 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.37□□□□□ -1.71
DEFA4P12838 AC008833.1-201ENST00000611633 691 ntBASIC4.37□□□□□ -1.71
DEFA4P12838 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.37□□□□□ -1.71
DEFA4P12838 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.37□□□□□ -1.71
DEFA4P12838 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.37□□□□□ -1.71
DEFA4P12838 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.37□□□□□ -1.71
DEFA4P12838 MIR193BHG-214ENST00000641765 509 ntBASIC4.37□□□□□ -1.71
DEFA4P12838 AC003985.2-201ENST00000562268 1669 ntBASIC4.37□□□□□ -1.71
DEFA4P12838 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
DEFA4P12838 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
DEFA4P12838 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
DEFA4P12838 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.37□□□□□ -1.71
DEFA4P12838 AC114786.1-201ENST00000512892 1415 ntBASIC4.37□□□□□ -1.71
DEFA4P12838 SRRM1P3-201ENST00000426911 2678 ntBASIC4.37□□□□□ -1.71
DEFA4P12838 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.36□□□□□ -1.71
DEFA4P12838 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
DEFA4P12838 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
DEFA4P12838 AC006600.2-201ENST00000624834 2506 ntBASIC4.36□□□□□ -1.71
DEFA4P12838 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
DEFA4P12838 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
DEFA4P12838 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
DEFA4P12838 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.36□□□□□ -1.71
DEFA4P12838 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC4.36□□□□□ -1.71
DEFA4P12838 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.36□□□□□ -1.71
DEFA4P12838 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
DEFA4P12838 U3.7-201ENST00000363668 216 ntBASIC4.36□□□□□ -1.71
DEFA4P12838 RNA5SP394-201ENST00000364216 119 ntBASIC4.36□□□□□ -1.71
DEFA4P12838 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC4.36□□□□□ -1.71
DEFA4P12838 RNA5SP241-201ENST00000391326 114 ntBASIC4.36□□□□□ -1.71
DEFA4P12838 PPIAP9-201ENST00000403866 498 ntBASIC4.36□□□□□ -1.71
DEFA4P12838 GAPDHP42-201ENST00000406848 981 ntBASIC4.36□□□□□ -1.71
DEFA4P12838 RNU2-18P-201ENST00000411224 162 ntBASIC4.36□□□□□ -1.71
DEFA4P12838 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
DEFA4P12838 HMGN2P27-201ENST00000427352 270 ntBASIC4.36□□□□□ -1.71
DEFA4P12838 CDY8P-201ENST00000428380 1279 ntBASIC4.36□□□□□ -1.71
DEFA4P12838 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.36□□□□□ -1.71
DEFA4P12838 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC4.36□□□□□ -1.71
DEFA4P12838 CDY20P-201ENST00000447528 1279 ntBASIC4.36□□□□□ -1.71
DEFA4P12838 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
DEFA4P12838 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.36□□□□□ -1.71
DEFA4P12838 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC4.36□□□□□ -1.71
DEFA4P12838 AP000547.1-201ENST00000454360 617 ntBASIC4.36□□□□□ -1.71
DEFA4P12838 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC4.36□□□□□ -1.71
DEFA4P12838 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC4.36□□□□□ -1.71
DEFA4P12838 AC094085.1-201ENST00000468914 584 ntBASIC4.36□□□□□ -1.71
DEFA4P12838 PFN1P8-201ENST00000497012 543 ntBASIC4.36□□□□□ -1.71
DEFA4P12838 RNU6ATAC39P-201ENST00000516309 149 ntBASIC4.36□□□□□ -1.71
DEFA4P12838 SNORA43.3-201ENST00000517240 103 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms