Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.49□□□□□ -1.37
COL1A1P02452 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.49□□□□□ -1.37
COL1A1P02452 YWHABP2-201ENST00000540201 713 ntBASIC6.49□□□□□ -1.37
COL1A1P02452 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.49□□□□□ -1.37
COL1A1P02452 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.49□□□□□ -1.37
COL1A1P02452 AC060766.1-201ENST00000590824 627 ntBASIC6.49□□□□□ -1.37
COL1A1P02452 AC015712.7-201ENST00000615211 635 ntBASIC6.49□□□□□ -1.37
COL1A1P02452 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.49□□□□□ -1.37
COL1A1P02452 AC091953.3-201ENST00000623220 236 ntBASIC6.49□□□□□ -1.37
COL1A1P02452 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL1A1P02452 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL1A1P02452 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL1A1P02452 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
COL1A1P02452 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.49□□□□□ -1.37
COL1A1P02452 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL1A1P02452 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL1A1P02452 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.49□□□□□ -1.37
COL1A1P02452 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL1A1P02452 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL1A1P02452 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.48□□□□□ -1.37
COL1A1P02452 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC6.48□□□□□ -1.37
COL1A1P02452 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
COL1A1P02452 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.48□□□□□ -1.37
COL1A1P02452 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.48□□□□□ -1.37
COL1A1P02452 RHOT1P3-201ENST00000436571 331 ntBASIC6.48□□□□□ -1.37
COL1A1P02452 Z80107.2-201ENST00000445127 392 ntBASIC6.48□□□□□ -1.37
COL1A1P02452 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.48□□□□□ -1.37
COL1A1P02452 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.48□□□□□ -1.37
COL1A1P02452 AC092754.1-201ENST00000472975 479 ntBASIC6.48□□□□□ -1.37
COL1A1P02452 UBE2Q2P10-201ENST00000514854 900 ntBASIC6.48□□□□□ -1.37
COL1A1P02452 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.48□□□□□ -1.37
COL1A1P02452 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC6.48□□□□□ -1.37
COL1A1P02452 AC005341.1-201ENST00000571086 708 ntBASIC6.48□□□□□ -1.37
COL1A1P02452 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC6.48□□□□□ -1.37
COL1A1P02452 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.48□□□□□ -1.37
COL1A1P02452 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL1A1P02452 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL1A1P02452 AC138907.8-201ENST00000623981 2256 ntBASIC6.48□□□□□ -1.37
COL1A1P02452 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL1A1P02452 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL1A1P02452 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL1A1P02452 CASC19-281ENST00000642118 1554 ntBASIC6.48□□□□□ -1.37
COL1A1P02452 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL1A1P02452 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL1A1P02452 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL1A1P02452 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.48□□□□□ -1.37
COL1A1P02452 AC114774.1-201ENST00000507410 1770 ntBASIC6.48□□□□□ -1.37
COL1A1P02452 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL1A1P02452 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL1A1P02452 PPIAP9-201ENST00000403866 498 ntBASIC6.47□□□□□ -1.37
COL1A1P02452 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.47□□□□□ -1.37
COL1A1P02452 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL1A1P02452 AC073072.2-201ENST00000447425 348 ntBASIC6.47□□□□□ -1.37
COL1A1P02452 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.47□□□□□ -1.37
COL1A1P02452 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.47□□□□□ -1.37
COL1A1P02452 RPS3AP41-201ENST00000462701 778 ntBASIC6.47□□□□□ -1.37
COL1A1P02452 AC090142.2-201ENST00000483263 416 ntBASIC6.47□□□□□ -1.37
COL1A1P02452 IGLV2-34-201ENST00000490007 283 ntBASIC6.47□□□□□ -1.37
COL1A1P02452 OR5AZ1P-201ENST00000527448 943 ntBASIC6.47□□□□□ -1.37
COL1A1P02452 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.47□□□□□ -1.37
COL1A1P02452 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.47□□□□□ -1.37
COL1A1P02452 AC012557.1-201ENST00000607115 611 ntBASIC6.47□□□□□ -1.37
COL1A1P02452 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.47□□□□□ -1.37
COL1A1P02452 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC6.47□□□□□ -1.37
COL1A1P02452 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL1A1P02452 AC073342.2-201ENST00000595842 1800 ntBASIC6.47□□□□□ -1.37
COL1A1P02452 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
COL1A1P02452 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL1A1P02452 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
COL1A1P02452 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
COL1A1P02452 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.47□□□□□ -1.37
COL1A1P02452 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL1A1P02452 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL1A1P02452 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL1A1P02452 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.47□□□□□ -1.37
COL1A1P02452 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
COL1A1P02452 AL731532.1-201ENST00000623972 4236 ntBASIC6.47□□□□□ -1.37
COL1A1P02452 PANDAR-201ENST00000629595 1506 ntBASIC6.47□□□□□ -1.37
COL1A1P02452 AC022893.2-201ENST00000564832 3296 ntBASIC6.47□□□□□ -1.37
COL1A1P02452 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
COL1A1P02452 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL1A1P02452 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
COL1A1P02452 RN7SKP126-201ENST00000411143 300 ntBASIC6.47□□□□□ -1.37
COL1A1P02452 AC093162.1-201ENST00000419682 124 ntBASIC6.47□□□□□ -1.37
COL1A1P02452 RPL12P17-201ENST00000432393 498 ntBASIC6.47□□□□□ -1.37
COL1A1P02452 RN7SL423P-201ENST00000486202 304 ntBASIC6.47□□□□□ -1.37
COL1A1P02452 AC093890.1-201ENST00000502554 540 ntBASIC6.47□□□□□ -1.37
COL1A1P02452 SCARNA20.4-201ENST00000516969 131 ntBASIC6.47□□□□□ -1.37
COL1A1P02452 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.47□□□□□ -1.37
COL1A1P02452 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.47□□□□□ -1.37
COL1A1P02452 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.47□□□□□ -1.37
COL1A1P02452 MIR4330-201ENST00000579077 105 ntBASIC6.47□□□□□ -1.37
COL1A1P02452 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC6.47□□□□□ -1.37
COL1A1P02452 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC6.47□□□□□ -1.37
COL1A1P02452 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL1A1P02452 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL1A1P02452 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
COL1A1P02452 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.46□□□□□ -1.37
COL1A1P02452 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.46□□□□□ -1.37
COL1A1P02452 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms