Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.28□□□□□ -1.56
HCN1O60741 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.28□□□□□ -1.56
HCN1O60741 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
HCN1O60741 RNA5SP46-201ENST00000362370 120 ntBASIC5.28□□□□□ -1.56
HCN1O60741 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
HCN1O60741 RNA5SP91-201ENST00000390902 119 ntBASIC5.28□□□□□ -1.56
HCN1O60741 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HCN1O60741 RNU2-22P-201ENST00000411266 212 ntBASIC5.28□□□□□ -1.56
HCN1O60741 MRPL53P1-201ENST00000414323 319 ntBASIC5.28□□□□□ -1.56
HCN1O60741 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.28□□□□□ -1.56
HCN1O60741 YWHAEP1-201ENST00000453697 763 ntBASIC5.28□□□□□ -1.56
HCN1O60741 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.28□□□□□ -1.56
HCN1O60741 AL136038.1-201ENST00000497246 351 ntBASIC5.28□□□□□ -1.56
HCN1O60741 AC105384.2-201ENST00000508433 640 ntBASIC5.28□□□□□ -1.56
HCN1O60741 RNA5SP230-201ENST00000517039 122 ntBASIC5.28□□□□□ -1.56
HCN1O60741 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.28□□□□□ -1.56
HCN1O60741 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.28□□□□□ -1.56
HCN1O60741 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.28□□□□□ -1.56
HCN1O60741 AC022404.1-201ENST00000555320 273 ntBASIC5.28□□□□□ -1.56
HCN1O60741 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.28□□□□□ -1.56
HCN1O60741 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.28□□□□□ -1.56
HCN1O60741 AC015802.2-201ENST00000589690 189 ntBASIC5.28□□□□□ -1.56
HCN1O60741 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.28□□□□□ -1.56
HCN1O60741 OR51C1P-201ENST00000608504 942 ntBASIC5.28□□□□□ -1.56
HCN1O60741 AL451049.1-201ENST00000608672 497 ntBASIC5.28□□□□□ -1.56
HCN1O60741 AP003072.5-201ENST00000623872 773 ntBASIC5.28□□□□□ -1.56
HCN1O60741 AC087565.3-203ENST00000641018 837 ntBASIC5.28□□□□□ -1.56
HCN1O60741 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
HCN1O60741 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HCN1O60741 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HCN1O60741 AL031595.2-201ENST00000624215 19071 ntBASIC5.28□□□□□ -1.56
HCN1O60741 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HCN1O60741 AC123912.3-201ENST00000600907 1367 ntBASIC5.28□□□□□ -1.56
HCN1O60741 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.28□□□□□ -1.56
HCN1O60741 MFSD8-239ENST00000641590 2479 ntBASIC5.28□□□□□ -1.56
HCN1O60741 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HCN1O60741 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.27□□□□□ -1.57
HCN1O60741 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HCN1O60741 AC117409.1-201ENST00000470499 1310 ntBASIC5.27□□□□□ -1.57
HCN1O60741 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.27□□□□□ -1.57
HCN1O60741 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
HCN1O60741 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.27□□□□□ -1.57
HCN1O60741 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.27□□□□□ -1.57
HCN1O60741 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HCN1O60741 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
HCN1O60741 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
HCN1O60741 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
HCN1O60741 AC019205.1-201ENST00000421830 730 ntBASIC5.27□□□□□ -1.57
HCN1O60741 AC127526.2-201ENST00000426436 775 ntBASIC5.27□□□□□ -1.57
HCN1O60741 AL121776.1-201ENST00000429337 372 ntBASIC5.27□□□□□ -1.57
HCN1O60741 AC002504.1-201ENST00000438281 691 ntBASIC5.27□□□□□ -1.57
HCN1O60741 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.27□□□□□ -1.57
HCN1O60741 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.27□□□□□ -1.57
HCN1O60741 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.27□□□□□ -1.57
HCN1O60741 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.27□□□□□ -1.57
HCN1O60741 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.27□□□□□ -1.57
HCN1O60741 AC093166.4-201ENST00000457867 318 ntBASIC5.27□□□□□ -1.57
HCN1O60741 RPSAP39-201ENST00000467439 883 ntBASIC5.27□□□□□ -1.57
HCN1O60741 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.27□□□□□ -1.57
HCN1O60741 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.27□□□□□ -1.57
HCN1O60741 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.27□□□□□ -1.57
HCN1O60741 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.27□□□□□ -1.57
HCN1O60741 AL353729.2-201ENST00000605859 1249 ntBASIC5.27□□□□□ -1.57
HCN1O60741 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.27□□□□□ -1.57
HCN1O60741 FAM72A-208ENST00000607379 1139 ntBASIC5.27□□□□□ -1.57
HCN1O60741 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.27□□□□□ -1.57
HCN1O60741 AP000894.4-201ENST00000610185 483 ntBASIC5.27□□□□□ -1.57
HCN1O60741 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HCN1O60741 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.27□□□□□ -1.57
HCN1O60741 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
HCN1O60741 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.27□□□□□ -1.57
HCN1O60741 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
HCN1O60741 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.27□□□□□ -1.57
HCN1O60741 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.27□□□□□ -1.57
HCN1O60741 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.27□□□□□ -1.57
HCN1O60741 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
HCN1O60741 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HCN1O60741 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
HCN1O60741 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HCN1O60741 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
HCN1O60741 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
HCN1O60741 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
HCN1O60741 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HCN1O60741 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
HCN1O60741 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HCN1O60741 MAPK10-328ENST00000641553 4009 ntBASIC5.26□□□□□ -1.57
HCN1O60741 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.26□□□□□ -1.57
HCN1O60741 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
HCN1O60741 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
HCN1O60741 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HCN1O60741 SNORA51.1-201ENST00000363243 140 ntBASIC5.26□□□□□ -1.57
HCN1O60741 RNA5SP242-201ENST00000364171 118 ntBASIC5.26□□□□□ -1.57
HCN1O60741 RNU1-136P-201ENST00000384181 164 ntBASIC5.26□□□□□ -1.57
HCN1O60741 HMGB1P20-201ENST00000402555 677 ntBASIC5.26□□□□□ -1.57
HCN1O60741 AL358178.1-201ENST00000407698 397 ntBASIC5.26□□□□□ -1.57
HCN1O60741 BMS1P17-202ENST00000416720 316 ntBASIC5.26□□□□□ -1.57
HCN1O60741 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.26□□□□□ -1.57
HCN1O60741 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HCN1O60741 BTG3P1-201ENST00000435859 716 ntBASIC5.26□□□□□ -1.57
HCN1O60741 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 154.1 ms