Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGB3Q9Y5G1 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGB3Q9Y5G1 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGB3Q9Y5G1 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGB3Q9Y5G1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGB3Q9Y5G1 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGB3Q9Y5G1 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGB3Q9Y5G1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGB3Q9Y5G1 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGB3Q9Y5G1 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PCDHGB3Q9Y5G1 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.58■□□□□ 0.56
PCDHGB3Q9Y5G1 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.58■□□□□ 0.56
PCDHGB3Q9Y5G1 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGB3Q9Y5G1 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGB3Q9Y5G1 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGB3Q9Y5G1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PCDHGB3Q9Y5G1 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGB3Q9Y5G1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
PCDHGB3Q9Y5G1 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHGB3Q9Y5G1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGB3Q9Y5G1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.58■□□□□ 0.56
PCDHGB3Q9Y5G1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
PCDHGB3Q9Y5G1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGB3Q9Y5G1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGB3Q9Y5G1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.58■□□□□ 0.56
PCDHGB3Q9Y5G1 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB3Q9Y5G1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHGB3Q9Y5G1 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PCDHGB3Q9Y5G1 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB3Q9Y5G1 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PCDHGB3Q9Y5G1 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.57■□□□□ 0.56
PCDHGB3Q9Y5G1 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB3Q9Y5G1 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB3Q9Y5G1 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB3Q9Y5G1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB3Q9Y5G1 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.57■□□□□ 0.56
PCDHGB3Q9Y5G1 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHGB3Q9Y5G1 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB3Q9Y5G1 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHGB3Q9Y5G1 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHGB3Q9Y5G1 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHGB3Q9Y5G1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.57■□□□□ 0.56
PCDHGB3Q9Y5G1 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.57■□□□□ 0.56
PCDHGB3Q9Y5G1 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB3Q9Y5G1 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB3Q9Y5G1 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB3Q9Y5G1 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB3Q9Y5G1 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB3Q9Y5G1 TNXA-203ENST00000507684 2038 ntBASIC18.57■□□□□ 0.56
PCDHGB3Q9Y5G1 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
PCDHGB3Q9Y5G1 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PCDHGB3Q9Y5G1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHGB3Q9Y5G1 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
PCDHGB3Q9Y5G1 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB3Q9Y5G1 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB3Q9Y5G1 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGB3Q9Y5G1 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PCDHGB3Q9Y5G1 AC093484.2-201ENST00000580996 2166 ntBASIC18.57■□□□□ 0.56
PCDHGB3Q9Y5G1 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGB3Q9Y5G1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PCDHGB3Q9Y5G1 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
PCDHGB3Q9Y5G1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGB3Q9Y5G1 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGB3Q9Y5G1 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGB3Q9Y5G1 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGB3Q9Y5G1 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGB3Q9Y5G1 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGB3Q9Y5G1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGB3Q9Y5G1 TREX1-205ENST00000625293 1783 ntBASIC18.56■□□□□ 0.56
PCDHGB3Q9Y5G1 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGB3Q9Y5G1 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PCDHGB3Q9Y5G1 DUSP5P2-201ENST00000426873 1033 ntBASIC18.56■□□□□ 0.56
PCDHGB3Q9Y5G1 POU5F1P3-201ENST00000428824 1078 ntBASIC18.56■□□□□ 0.56
PCDHGB3Q9Y5G1 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGB3Q9Y5G1 AC083880.1-201ENST00000608266 535 ntBASIC18.56■□□□□ 0.56
PCDHGB3Q9Y5G1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PCDHGB3Q9Y5G1 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDHGB3Q9Y5G1 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGB3Q9Y5G1 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGB3Q9Y5G1 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
PCDHGB3Q9Y5G1 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGB3Q9Y5G1 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGB3Q9Y5G1 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGB3Q9Y5G1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDHGB3Q9Y5G1 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.55■□□□□ 0.56
PCDHGB3Q9Y5G1 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDHGB3Q9Y5G1 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGB3Q9Y5G1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGB3Q9Y5G1 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGB3Q9Y5G1 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGB3Q9Y5G1 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGB3Q9Y5G1 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHGB3Q9Y5G1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDHGB3Q9Y5G1 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.55■□□□□ 0.56
PCDHGB3Q9Y5G1 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGB3Q9Y5G1 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGB3Q9Y5G1 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGB3Q9Y5G1 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGB3Q9Y5G1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PCDHGB3Q9Y5G1 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms