Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB13Q9Y5F0 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB13Q9Y5F0 POU5F1P3-201ENST00000428824 1078 ntBASIC21.67■■□□□ 1.06
PCDHB13Q9Y5F0 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.67■■□□□ 1.06
PCDHB13Q9Y5F0 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.67■■□□□ 1.06
PCDHB13Q9Y5F0 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB13Q9Y5F0 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
PCDHB13Q9Y5F0 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB13Q9Y5F0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB13Q9Y5F0 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB13Q9Y5F0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
PCDHB13Q9Y5F0 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.66■■□□□ 1.06
PCDHB13Q9Y5F0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.66■■□□□ 1.06
PCDHB13Q9Y5F0 AP006587.1-201ENST00000534129 1502 ntBASIC21.66■■□□□ 1.06
PCDHB13Q9Y5F0 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB13Q9Y5F0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.66■■□□□ 1.06
PCDHB13Q9Y5F0 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB13Q9Y5F0 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB13Q9Y5F0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB13Q9Y5F0 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.66■■□□□ 1.06
PCDHB13Q9Y5F0 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB13Q9Y5F0 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.66■■□□□ 1.06
PCDHB13Q9Y5F0 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.66■■□□□ 1.06
PCDHB13Q9Y5F0 PRKY-204ENST00000533551 1019 ntBASIC21.66■■□□□ 1.06
PCDHB13Q9Y5F0 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.66■■□□□ 1.06
PCDHB13Q9Y5F0 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB13Q9Y5F0 AC069544.1-201ENST00000609399 999 ntBASIC21.66■■□□□ 1.06
PCDHB13Q9Y5F0 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB13Q9Y5F0 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
PCDHB13Q9Y5F0 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
PCDHB13Q9Y5F0 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB13Q9Y5F0 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB13Q9Y5F0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB13Q9Y5F0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB13Q9Y5F0 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.66■■□□□ 1.06
PCDHB13Q9Y5F0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB13Q9Y5F0 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
PCDHB13Q9Y5F0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.65■■□□□ 1.06
PCDHB13Q9Y5F0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.65■■□□□ 1.06
PCDHB13Q9Y5F0 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB13Q9Y5F0 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB13Q9Y5F0 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDHB13Q9Y5F0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB13Q9Y5F0 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB13Q9Y5F0 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.65■■□□□ 1.06
PCDHB13Q9Y5F0 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.65■■□□□ 1.06
PCDHB13Q9Y5F0 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.65■■□□□ 1.06
PCDHB13Q9Y5F0 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.65■■□□□ 1.06
PCDHB13Q9Y5F0 AC006058.3-201ENST00000606217 1069 ntBASIC21.65■■□□□ 1.06
PCDHB13Q9Y5F0 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB13Q9Y5F0 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB13Q9Y5F0 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDHB13Q9Y5F0 AL158211.5-201ENST00000623583 2518 ntBASIC21.65■■□□□ 1.06
PCDHB13Q9Y5F0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB13Q9Y5F0 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB13Q9Y5F0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
PCDHB13Q9Y5F0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB13Q9Y5F0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHB13Q9Y5F0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHB13Q9Y5F0 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.64■■□□□ 1.06
PCDHB13Q9Y5F0 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHB13Q9Y5F0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.64■■□□□ 1.05
PCDHB13Q9Y5F0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
PCDHB13Q9Y5F0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.64■■□□□ 1.05
PCDHB13Q9Y5F0 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHB13Q9Y5F0 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.64■■□□□ 1.05
PCDHB13Q9Y5F0 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC21.64■■□□□ 1.05
PCDHB13Q9Y5F0 MTDHP1-201ENST00000605323 784 ntBASIC21.64■■□□□ 1.05
PCDHB13Q9Y5F0 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.64■■□□□ 1.05
PCDHB13Q9Y5F0 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.64■■□□□ 1.05
PCDHB13Q9Y5F0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHB13Q9Y5F0 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHB13Q9Y5F0 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHB13Q9Y5F0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.64■■□□□ 1.05
PCDHB13Q9Y5F0 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.64■■□□□ 1.05
PCDHB13Q9Y5F0 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHB13Q9Y5F0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHB13Q9Y5F0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
PCDHB13Q9Y5F0 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHB13Q9Y5F0 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHB13Q9Y5F0 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
PCDHB13Q9Y5F0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHB13Q9Y5F0 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB13Q9Y5F0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.63■■□□□ 1.05
PCDHB13Q9Y5F0 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB13Q9Y5F0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB13Q9Y5F0 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PCDHB13Q9Y5F0 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.63■■□□□ 1.05
PCDHB13Q9Y5F0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB13Q9Y5F0 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.63■■□□□ 1.05
PCDHB13Q9Y5F0 FAM201B-201ENST00000458407 597 ntBASIC21.63■■□□□ 1.05
PCDHB13Q9Y5F0 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.63■■□□□ 1.05
PCDHB13Q9Y5F0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.63■■□□□ 1.05
PCDHB13Q9Y5F0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.63■■□□□ 1.05
PCDHB13Q9Y5F0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.63■■□□□ 1.05
PCDHB13Q9Y5F0 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB13Q9Y5F0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.63■■□□□ 1.05
PCDHB13Q9Y5F0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
PCDHB13Q9Y5F0 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB13Q9Y5F0 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms