Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VPS9D1Q9Y2B5 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VPS9D1Q9Y2B5 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VPS9D1Q9Y2B5 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VPS9D1Q9Y2B5 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VPS9D1Q9Y2B5 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.51■□□□□ 0.71
VPS9D1Q9Y2B5 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.51■□□□□ 0.71
VPS9D1Q9Y2B5 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.51■□□□□ 0.71
VPS9D1Q9Y2B5 AC098934.4-201ENST00000564127 592 ntBASIC19.51■□□□□ 0.71
VPS9D1Q9Y2B5 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.51■□□□□ 0.71
VPS9D1Q9Y2B5 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
VPS9D1Q9Y2B5 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VPS9D1Q9Y2B5 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VPS9D1Q9Y2B5 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
VPS9D1Q9Y2B5 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VPS9D1Q9Y2B5 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.51■□□□□ 0.71
VPS9D1Q9Y2B5 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
VPS9D1Q9Y2B5 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VPS9D1Q9Y2B5 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
VPS9D1Q9Y2B5 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.51■□□□□ 0.71
VPS9D1Q9Y2B5 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VPS9D1Q9Y2B5 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VPS9D1Q9Y2B5 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
VPS9D1Q9Y2B5 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VPS9D1Q9Y2B5 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VPS9D1Q9Y2B5 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
VPS9D1Q9Y2B5 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VPS9D1Q9Y2B5 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.5■□□□□ 0.71
VPS9D1Q9Y2B5 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.5■□□□□ 0.71
VPS9D1Q9Y2B5 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.5■□□□□ 0.71
VPS9D1Q9Y2B5 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.5■□□□□ 0.71
VPS9D1Q9Y2B5 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
VPS9D1Q9Y2B5 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.5■□□□□ 0.71
VPS9D1Q9Y2B5 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.5■□□□□ 0.71
VPS9D1Q9Y2B5 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
VPS9D1Q9Y2B5 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VPS9D1Q9Y2B5 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
VPS9D1Q9Y2B5 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VPS9D1Q9Y2B5 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VPS9D1Q9Y2B5 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
VPS9D1Q9Y2B5 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
VPS9D1Q9Y2B5 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VPS9D1Q9Y2B5 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
VPS9D1Q9Y2B5 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VPS9D1Q9Y2B5 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.49■□□□□ 0.71
VPS9D1Q9Y2B5 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.49■□□□□ 0.71
VPS9D1Q9Y2B5 AC120498.8-201ENST00000614275 531 ntBASIC19.49■□□□□ 0.71
VPS9D1Q9Y2B5 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.49■□□□□ 0.71
VPS9D1Q9Y2B5 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
VPS9D1Q9Y2B5 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
VPS9D1Q9Y2B5 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.49■□□□□ 0.71
VPS9D1Q9Y2B5 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
VPS9D1Q9Y2B5 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
VPS9D1Q9Y2B5 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS9D1Q9Y2B5 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.48■□□□□ 0.71
VPS9D1Q9Y2B5 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS9D1Q9Y2B5 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS9D1Q9Y2B5 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS9D1Q9Y2B5 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
VPS9D1Q9Y2B5 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.48■□□□□ 0.71
VPS9D1Q9Y2B5 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.48■□□□□ 0.71
VPS9D1Q9Y2B5 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.48■□□□□ 0.71
VPS9D1Q9Y2B5 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS9D1Q9Y2B5 AL355802.2-201ENST00000402069 882 ntBASIC19.48■□□□□ 0.71
VPS9D1Q9Y2B5 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS9D1Q9Y2B5 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VPS9D1Q9Y2B5 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.48■□□□□ 0.71
VPS9D1Q9Y2B5 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS9D1Q9Y2B5 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.48■□□□□ 0.71
VPS9D1Q9Y2B5 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.48■□□□□ 0.71
VPS9D1Q9Y2B5 SOX15-203ENST00000570788 1093 ntBASIC19.48■□□□□ 0.71
VPS9D1Q9Y2B5 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VPS9D1Q9Y2B5 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS9D1Q9Y2B5 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
VPS9D1Q9Y2B5 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.48■□□□□ 0.71
VPS9D1Q9Y2B5 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS9D1Q9Y2B5 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VPS9D1Q9Y2B5 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.48■□□□□ 0.71
VPS9D1Q9Y2B5 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
VPS9D1Q9Y2B5 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.47■□□□□ 0.71
VPS9D1Q9Y2B5 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.47■□□□□ 0.71
VPS9D1Q9Y2B5 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS9D1Q9Y2B5 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS9D1Q9Y2B5 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS9D1Q9Y2B5 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS9D1Q9Y2B5 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
VPS9D1Q9Y2B5 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.47■□□□□ 0.71
VPS9D1Q9Y2B5 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.47■□□□□ 0.71
VPS9D1Q9Y2B5 ID1-201ENST00000376105 1233 ntBASIC19.47■□□□□ 0.71
VPS9D1Q9Y2B5 HLA-L-209ENST00000420110 1011 ntBASIC19.47■□□□□ 0.71
VPS9D1Q9Y2B5 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.47■□□□□ 0.71
VPS9D1Q9Y2B5 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VPS9D1Q9Y2B5 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.47■□□□□ 0.71
VPS9D1Q9Y2B5 AL121829.2-201ENST00000620908 328 ntBASIC19.47■□□□□ 0.71
VPS9D1Q9Y2B5 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS9D1Q9Y2B5 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS9D1Q9Y2B5 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.47■□□□□ 0.71
VPS9D1Q9Y2B5 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS9D1Q9Y2B5 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS9D1Q9Y2B5 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms