Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
ZC3H4Q9UPT8 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC23.86■■□□□ 1.41
ZC3H4Q9UPT8 KRT8P45-201ENST00000414328 1447 ntBASIC23.86■■□□□ 1.41
ZC3H4Q9UPT8 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
ZC3H4Q9UPT8 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ZC3H4Q9UPT8 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ZC3H4Q9UPT8 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ZC3H4Q9UPT8 WWC2-AS2-201ENST00000578387 2183 ntBASIC23.86■■□□□ 1.41
ZC3H4Q9UPT8 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
ZC3H4Q9UPT8 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
ZC3H4Q9UPT8 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC23.85■■□□□ 1.41
ZC3H4Q9UPT8 SNX5-210ENST00000481323 562 ntTSL 3 BASIC23.85■■□□□ 1.41
ZC3H4Q9UPT8 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
ZC3H4Q9UPT8 MIR3652-201ENST00000579335 131 ntBASIC23.85■■□□□ 1.41
ZC3H4Q9UPT8 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC23.85■■□□□ 1.41
ZC3H4Q9UPT8 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.85■■□□□ 1.41
ZC3H4Q9UPT8 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
ZC3H4Q9UPT8 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
ZC3H4Q9UPT8 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
ZC3H4Q9UPT8 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
ZC3H4Q9UPT8 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC23.85■■□□□ 1.41
ZC3H4Q9UPT8 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
ZC3H4Q9UPT8 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
ZC3H4Q9UPT8 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC23.84■■□□□ 1.41
ZC3H4Q9UPT8 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC23.84■■□□□ 1.41
ZC3H4Q9UPT8 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
ZC3H4Q9UPT8 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC23.84■■□□□ 1.41
ZC3H4Q9UPT8 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
ZC3H4Q9UPT8 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23.84■■□□□ 1.41
ZC3H4Q9UPT8 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ZC3H4Q9UPT8 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ZC3H4Q9UPT8 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
ZC3H4Q9UPT8 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ZC3H4Q9UPT8 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC23.84■■□□□ 1.41
ZC3H4Q9UPT8 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
ZC3H4Q9UPT8 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
ZC3H4Q9UPT8 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ZC3H4Q9UPT8 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
ZC3H4Q9UPT8 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
ZC3H4Q9UPT8 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
ZC3H4Q9UPT8 STARP1-201ENST00000397973 869 ntBASIC23.84■■□□□ 1.41
ZC3H4Q9UPT8 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC23.84■■□□□ 1.41
ZC3H4Q9UPT8 CNP-204ENST00000472031 1019 ntTSL 2 BASIC23.84■■□□□ 1.41
ZC3H4Q9UPT8 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC23.84■■□□□ 1.41
ZC3H4Q9UPT8 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC23.84■■□□□ 1.41
ZC3H4Q9UPT8 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
ZC3H4Q9UPT8 HYMAI.1-201ENST00000620949 238 ntBASIC23.84■■□□□ 1.41
ZC3H4Q9UPT8 DFFB-212ENST00000625756 649 ntTSL 5 BASIC23.84■■□□□ 1.41
ZC3H4Q9UPT8 HLA-A-209ENST00000638375 975 ntBASIC23.84■■□□□ 1.41
ZC3H4Q9UPT8 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
ZC3H4Q9UPT8 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC23.83■■□□□ 1.41
ZC3H4Q9UPT8 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
ZC3H4Q9UPT8 TFP1-202ENST00000475455 1573 ntBASIC23.83■■□□□ 1.41
ZC3H4Q9UPT8 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
ZC3H4Q9UPT8 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.4
ZC3H4Q9UPT8 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
ZC3H4Q9UPT8 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
ZC3H4Q9UPT8 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
ZC3H4Q9UPT8 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
ZC3H4Q9UPT8 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC23.83■■□□□ 1.4
ZC3H4Q9UPT8 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC23.82■■□□□ 1.4
ZC3H4Q9UPT8 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ZC3H4Q9UPT8 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC23.82■■□□□ 1.4
ZC3H4Q9UPT8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC23.82■■□□□ 1.4
ZC3H4Q9UPT8 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ZC3H4Q9UPT8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ZC3H4Q9UPT8 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ZC3H4Q9UPT8 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ZC3H4Q9UPT8 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
ZC3H4Q9UPT8 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC23.82■■□□□ 1.4
ZC3H4Q9UPT8 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC23.82■■□□□ 1.4
ZC3H4Q9UPT8 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ZC3H4Q9UPT8 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ZC3H4Q9UPT8 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC23.82■■□□□ 1.4
ZC3H4Q9UPT8 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC23.82■■□□□ 1.4
ZC3H4Q9UPT8 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ZC3H4Q9UPT8 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ZC3H4Q9UPT8 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC23.82■■□□□ 1.4
ZC3H4Q9UPT8 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZC3H4Q9UPT8 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ZC3H4Q9UPT8 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZC3H4Q9UPT8 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZC3H4Q9UPT8 GOLGA2P6-201ENST00000340929 2049 ntBASIC23.81■■□□□ 1.4
ZC3H4Q9UPT8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
ZC3H4Q9UPT8 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZC3H4Q9UPT8 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
ZC3H4Q9UPT8 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC23.81■■□□□ 1.4
ZC3H4Q9UPT8 CKBP1-201ENST00000565489 1086 ntBASIC23.81■■□□□ 1.4
ZC3H4Q9UPT8 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ZC3H4Q9UPT8 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ZC3H4Q9UPT8 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZC3H4Q9UPT8 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC23.81■■□□□ 1.4
ZC3H4Q9UPT8 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC23.81■■□□□ 1.4
ZC3H4Q9UPT8 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZC3H4Q9UPT8 KRT8P17-201ENST00000453110 1448 ntBASIC23.81■■□□□ 1.4
ZC3H4Q9UPT8 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ZC3H4Q9UPT8 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC23.81■■□□□ 1.4
ZC3H4Q9UPT8 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
ZC3H4Q9UPT8 GUSBP5-202ENST00000510805 1989 ntBASIC23.8■■□□□ 1.4
ZC3H4Q9UPT8 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms