Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC29.89■■■□□ 2.37
COL17A1Q9UMD9 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
COL17A1Q9UMD9 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC29.89■■■□□ 2.37
COL17A1Q9UMD9 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
COL17A1Q9UMD9 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
COL17A1Q9UMD9 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC29.88■■■□□ 2.37
COL17A1Q9UMD9 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC29.88■■■□□ 2.37
COL17A1Q9UMD9 HBZP1-201ENST00000354915 429 ntBASIC29.88■■■□□ 2.37
COL17A1Q9UMD9 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC29.88■■■□□ 2.37
COL17A1Q9UMD9 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC29.88■■■□□ 2.37
COL17A1Q9UMD9 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC29.88■■■□□ 2.37
COL17A1Q9UMD9 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC29.88■■■□□ 2.37
COL17A1Q9UMD9 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC29.88■■■□□ 2.37
COL17A1Q9UMD9 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC29.88■■■□□ 2.37
COL17A1Q9UMD9 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC29.88■■■□□ 2.37
COL17A1Q9UMD9 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
COL17A1Q9UMD9 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
COL17A1Q9UMD9 AC116351.2-201ENST00000606540 1585 ntBASIC29.88■■■□□ 2.37
COL17A1Q9UMD9 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC29.88■■■□□ 2.37
COL17A1Q9UMD9 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC29.88■■■□□ 2.37
COL17A1Q9UMD9 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
COL17A1Q9UMD9 ECEL1P1-201ENST00000373592 1742 ntBASIC29.88■■■□□ 2.37
COL17A1Q9UMD9 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC29.88■■■□□ 2.37
COL17A1Q9UMD9 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC29.88■■■□□ 2.37
COL17A1Q9UMD9 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
COL17A1Q9UMD9 AL645929.1-201ENST00000420084 975 ntBASIC29.87■■■□□ 2.37
COL17A1Q9UMD9 CA15P1-201ENST00000481698 905 ntBASIC29.87■■■□□ 2.37
COL17A1Q9UMD9 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC29.87■■■□□ 2.37
COL17A1Q9UMD9 PALM-207ENST00000590161 2137 ntTSL 4 BASIC29.87■■■□□ 2.37
COL17A1Q9UMD9 AC016734.2-201ENST00000624325 1377 ntBASIC29.87■■■□□ 2.37
COL17A1Q9UMD9 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC29.87■■■□□ 2.37
COL17A1Q9UMD9 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
COL17A1Q9UMD9 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
COL17A1Q9UMD9 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
COL17A1Q9UMD9 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC29.87■■■□□ 2.37
COL17A1Q9UMD9 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
COL17A1Q9UMD9 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
COL17A1Q9UMD9 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC29.87■■■□□ 2.37
COL17A1Q9UMD9 AP002469.2-201ENST00000531724 424 ntBASIC29.87■■■□□ 2.37
COL17A1Q9UMD9 FGF14-AS2-201ENST00000606448 1074 ntBASIC29.87■■■□□ 2.37
COL17A1Q9UMD9 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
COL17A1Q9UMD9 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
COL17A1Q9UMD9 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
COL17A1Q9UMD9 ME2-206ENST00000638410 2289 ntTSL 5 BASIC29.86■■■□□ 2.37
COL17A1Q9UMD9 ME2-210ENST00000639255 2262 ntTSL 5 BASIC29.86■■■□□ 2.37
COL17A1Q9UMD9 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
COL17A1Q9UMD9 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
COL17A1Q9UMD9 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC29.86■■■□□ 2.37
COL17A1Q9UMD9 STAC-204ENST00000457375 1366 ntTSL 2 BASIC29.86■■■□□ 2.37
COL17A1Q9UMD9 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
COL17A1Q9UMD9 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
COL17A1Q9UMD9 TSPY19P-201ENST00000418461 509 ntBASIC29.86■■■□□ 2.37
COL17A1Q9UMD9 TSPY18P-201ENST00000441642 509 ntBASIC29.86■■■□□ 2.37
COL17A1Q9UMD9 TSSC2-201ENST00000450217 709 ntBASIC29.86■■■□□ 2.37
COL17A1Q9UMD9 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC29.86■■■□□ 2.37
COL17A1Q9UMD9 AC133561.1-201ENST00000568600 2415 ntBASIC29.85■■■□□ 2.37
COL17A1Q9UMD9 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
COL17A1Q9UMD9 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
COL17A1Q9UMD9 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
COL17A1Q9UMD9 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
COL17A1Q9UMD9 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
COL17A1Q9UMD9 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC29.85■■■□□ 2.37
COL17A1Q9UMD9 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
COL17A1Q9UMD9 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC29.85■■■□□ 2.37
COL17A1Q9UMD9 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC29.85■■■□□ 2.37
COL17A1Q9UMD9 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
COL17A1Q9UMD9 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
COL17A1Q9UMD9 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC29.84■■■□□ 2.37
COL17A1Q9UMD9 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
COL17A1Q9UMD9 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC29.84■■■□□ 2.37
COL17A1Q9UMD9 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
COL17A1Q9UMD9 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC29.84■■■□□ 2.37
COL17A1Q9UMD9 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
COL17A1Q9UMD9 NUS1P1-201ENST00000446295 882 ntBASIC29.84■■■□□ 2.37
COL17A1Q9UMD9 AC092183.1-201ENST00000469884 875 ntBASIC29.84■■■□□ 2.37
COL17A1Q9UMD9 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC29.84■■■□□ 2.37
COL17A1Q9UMD9 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC29.84■■■□□ 2.37
COL17A1Q9UMD9 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
COL17A1Q9UMD9 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
COL17A1Q9UMD9 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC29.84■■■□□ 2.37
COL17A1Q9UMD9 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC29.83■■■□□ 2.37
COL17A1Q9UMD9 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
COL17A1Q9UMD9 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC29.83■■■□□ 2.37
COL17A1Q9UMD9 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC29.83■■■□□ 2.37
COL17A1Q9UMD9 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
COL17A1Q9UMD9 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
COL17A1Q9UMD9 MRPL3P1-201ENST00000400109 1033 ntBASIC29.83■■■□□ 2.37
COL17A1Q9UMD9 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC29.83■■■□□ 2.37
COL17A1Q9UMD9 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC29.83■■■□□ 2.37
COL17A1Q9UMD9 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC29.83■■■□□ 2.37
COL17A1Q9UMD9 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC29.83■■■□□ 2.37
COL17A1Q9UMD9 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
COL17A1Q9UMD9 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
COL17A1Q9UMD9 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
COL17A1Q9UMD9 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
COL17A1Q9UMD9 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC29.82■■■□□ 2.36
COL17A1Q9UMD9 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC29.82■■■□□ 2.36
COL17A1Q9UMD9 H19-201ENST00000411754 1788 ntTSL 5 BASIC29.82■■■□□ 2.36
COL17A1Q9UMD9 TSPY12P-201ENST00000421279 868 ntBASIC29.82■■■□□ 2.36
COL17A1Q9UMD9 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC29.82■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms