Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.15■□□□□ 0.98
GTF3C4Q9UKN8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.15■□□□□ 0.98
GTF3C4Q9UKN8 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
GTF3C4Q9UKN8 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.15■□□□□ 0.98
GTF3C4Q9UKN8 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GTF3C4Q9UKN8 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
GTF3C4Q9UKN8 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GTF3C4Q9UKN8 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
GTF3C4Q9UKN8 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
GTF3C4Q9UKN8 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
GTF3C4Q9UKN8 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GTF3C4Q9UKN8 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
GTF3C4Q9UKN8 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
GTF3C4Q9UKN8 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.15■□□□□ 0.98
GTF3C4Q9UKN8 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
GTF3C4Q9UKN8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.14■□□□□ 0.98
GTF3C4Q9UKN8 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
GTF3C4Q9UKN8 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
GTF3C4Q9UKN8 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
GTF3C4Q9UKN8 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
GTF3C4Q9UKN8 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
GTF3C4Q9UKN8 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
GTF3C4Q9UKN8 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.14■□□□□ 0.97
GTF3C4Q9UKN8 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
GTF3C4Q9UKN8 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
GTF3C4Q9UKN8 AC008550.1-201ENST00000511500 884 ntBASIC21.14■□□□□ 0.97
GTF3C4Q9UKN8 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.14■□□□□ 0.97
GTF3C4Q9UKN8 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.14■□□□□ 0.97
GTF3C4Q9UKN8 AC007952.6-201ENST00000573168 2673 ntBASIC21.14■□□□□ 0.97
GTF3C4Q9UKN8 AC003957.1-201ENST00000625108 2673 ntBASIC21.14■□□□□ 0.97
GTF3C4Q9UKN8 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.14■□□□□ 0.97
GTF3C4Q9UKN8 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GTF3C4Q9UKN8 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GTF3C4Q9UKN8 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
GTF3C4Q9UKN8 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GTF3C4Q9UKN8 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GTF3C4Q9UKN8 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GTF3C4Q9UKN8 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.13■□□□□ 0.97
GTF3C4Q9UKN8 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.13■□□□□ 0.97
GTF3C4Q9UKN8 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GTF3C4Q9UKN8 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GTF3C4Q9UKN8 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.13■□□□□ 0.97
GTF3C4Q9UKN8 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.13■□□□□ 0.97
GTF3C4Q9UKN8 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GTF3C4Q9UKN8 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GTF3C4Q9UKN8 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
GTF3C4Q9UKN8 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
GTF3C4Q9UKN8 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.13■□□□□ 0.97
GTF3C4Q9UKN8 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.13■□□□□ 0.97
GTF3C4Q9UKN8 RPS2P4-201ENST00000476944 856 ntBASIC21.13■□□□□ 0.97
GTF3C4Q9UKN8 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
GTF3C4Q9UKN8 AC110285.5-201ENST00000611501 352 ntBASIC21.13■□□□□ 0.97
GTF3C4Q9UKN8 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.13■□□□□ 0.97
GTF3C4Q9UKN8 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.13■□□□□ 0.97
GTF3C4Q9UKN8 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GTF3C4Q9UKN8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
GTF3C4Q9UKN8 AL158211.5-201ENST00000623583 2518 ntBASIC21.13■□□□□ 0.97
GTF3C4Q9UKN8 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.13■□□□□ 0.97
GTF3C4Q9UKN8 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GTF3C4Q9UKN8 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
GTF3C4Q9UKN8 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.13■□□□□ 0.97
GTF3C4Q9UKN8 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
GTF3C4Q9UKN8 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
GTF3C4Q9UKN8 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.12■□□□□ 0.97
GTF3C4Q9UKN8 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
GTF3C4Q9UKN8 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
GTF3C4Q9UKN8 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GTF3C4Q9UKN8 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.12■□□□□ 0.97
GTF3C4Q9UKN8 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.12■□□□□ 0.97
GTF3C4Q9UKN8 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
GTF3C4Q9UKN8 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.12■□□□□ 0.97
GTF3C4Q9UKN8 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.12■□□□□ 0.97
GTF3C4Q9UKN8 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.12■□□□□ 0.97
GTF3C4Q9UKN8 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.12■□□□□ 0.97
GTF3C4Q9UKN8 AL121906.2-201ENST00000621597 723 ntBASIC21.12■□□□□ 0.97
GTF3C4Q9UKN8 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.12■□□□□ 0.97
GTF3C4Q9UKN8 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
GTF3C4Q9UKN8 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.12■□□□□ 0.97
GTF3C4Q9UKN8 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.12■□□□□ 0.97
GTF3C4Q9UKN8 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GTF3C4Q9UKN8 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GTF3C4Q9UKN8 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
GTF3C4Q9UKN8 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
GTF3C4Q9UKN8 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.11■□□□□ 0.97
GTF3C4Q9UKN8 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.11■□□□□ 0.97
GTF3C4Q9UKN8 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GTF3C4Q9UKN8 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.11■□□□□ 0.97
GTF3C4Q9UKN8 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.11■□□□□ 0.97
GTF3C4Q9UKN8 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.11■□□□□ 0.97
GTF3C4Q9UKN8 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
GTF3C4Q9UKN8 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.11■□□□□ 0.97
GTF3C4Q9UKN8 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.11■□□□□ 0.97
GTF3C4Q9UKN8 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.11■□□□□ 0.97
GTF3C4Q9UKN8 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.11■□□□□ 0.97
GTF3C4Q9UKN8 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.11■□□□□ 0.97
GTF3C4Q9UKN8 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GTF3C4Q9UKN8 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GTF3C4Q9UKN8 KRT16P6-202ENST00000425692 1426 ntBASIC21.11■□□□□ 0.97
GTF3C4Q9UKN8 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GTF3C4Q9UKN8 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms