Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTSFQ9UBX1 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.49■□□□□ 0.55
CTSFQ9UBX1 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTSFQ9UBX1 AL355355.2-201ENST00000442321 338 ntBASIC18.49■□□□□ 0.55
CTSFQ9UBX1 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTSFQ9UBX1 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.49■□□□□ 0.55
CTSFQ9UBX1 BX088651.1-201ENST00000540551 451 ntBASIC18.49■□□□□ 0.55
CTSFQ9UBX1 AC073912.3-201ENST00000624414 853 ntBASIC18.49■□□□□ 0.55
CTSFQ9UBX1 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTSFQ9UBX1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTSFQ9UBX1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTSFQ9UBX1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.48■□□□□ 0.55
CTSFQ9UBX1 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CTSFQ9UBX1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.48■□□□□ 0.55
CTSFQ9UBX1 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CTSFQ9UBX1 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTSFQ9UBX1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.48■□□□□ 0.55
CTSFQ9UBX1 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.48■□□□□ 0.55
CTSFQ9UBX1 CR392000.1-201ENST00000624770 1228 ntBASIC18.48■□□□□ 0.55
CTSFQ9UBX1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
CTSFQ9UBX1 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTSFQ9UBX1 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.48■□□□□ 0.55
CTSFQ9UBX1 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CTSFQ9UBX1 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTSFQ9UBX1 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CTSFQ9UBX1 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.48■□□□□ 0.55
CTSFQ9UBX1 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTSFQ9UBX1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
CTSFQ9UBX1 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTSFQ9UBX1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.47■□□□□ 0.55
CTSFQ9UBX1 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTSFQ9UBX1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTSFQ9UBX1 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTSFQ9UBX1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTSFQ9UBX1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTSFQ9UBX1 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTSFQ9UBX1 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.47■□□□□ 0.55
CTSFQ9UBX1 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.47■□□□□ 0.55
CTSFQ9UBX1 TUBB8P6-201ENST00000436895 1288 ntBASIC18.47■□□□□ 0.55
CTSFQ9UBX1 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTSFQ9UBX1 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTSFQ9UBX1 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTSFQ9UBX1 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.47■□□□□ 0.55
CTSFQ9UBX1 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.47■□□□□ 0.55
CTSFQ9UBX1 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.47■□□□□ 0.55
CTSFQ9UBX1 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.47■□□□□ 0.55
CTSFQ9UBX1 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTSFQ9UBX1 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CTSFQ9UBX1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTSFQ9UBX1 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.47■□□□□ 0.55
CTSFQ9UBX1 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.47■□□□□ 0.55
CTSFQ9UBX1 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTSFQ9UBX1 AC073130.3-201ENST00000624389 2278 ntBASIC18.47■□□□□ 0.55
CTSFQ9UBX1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.47■□□□□ 0.55
CTSFQ9UBX1 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CTSFQ9UBX1 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTSFQ9UBX1 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CTSFQ9UBX1 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTSFQ9UBX1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTSFQ9UBX1 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTSFQ9UBX1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTSFQ9UBX1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTSFQ9UBX1 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.46■□□□□ 0.55
CTSFQ9UBX1 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CTSFQ9UBX1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.46■□□□□ 0.55
CTSFQ9UBX1 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTSFQ9UBX1 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CTSFQ9UBX1 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTSFQ9UBX1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTSFQ9UBX1 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CTSFQ9UBX1 KSR1P1-201ENST00000446298 240 ntBASIC18.46■□□□□ 0.55
CTSFQ9UBX1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.46■□□□□ 0.55
CTSFQ9UBX1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CTSFQ9UBX1 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CTSFQ9UBX1 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.46■□□□□ 0.55
CTSFQ9UBX1 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CTSFQ9UBX1 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.46■□□□□ 0.55
CTSFQ9UBX1 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.46■□□□□ 0.55
CTSFQ9UBX1 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTSFQ9UBX1 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTSFQ9UBX1 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTSFQ9UBX1 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTSFQ9UBX1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CTSFQ9UBX1 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.46■□□□□ 0.55
CTSFQ9UBX1 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTSFQ9UBX1 AP001271.2-201ENST00000624018 1556 ntBASIC18.46■□□□□ 0.55
CTSFQ9UBX1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTSFQ9UBX1 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTSFQ9UBX1 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTSFQ9UBX1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTSFQ9UBX1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTSFQ9UBX1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTSFQ9UBX1 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTSFQ9UBX1 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CTSFQ9UBX1 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CTSFQ9UBX1 AC099778.1-201ENST00000568593 1911 ntBASIC18.45■□□□□ 0.54
CTSFQ9UBX1 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CTSFQ9UBX1 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTSFQ9UBX1 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.45■□□□□ 0.54
CTSFQ9UBX1 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms